Zea mays (maize): 100191475
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Entry
100191475 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100191475
KO
K13174
THO complex subunit 5
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100191475
09122 Translation
03013 Nucleocytoplasmic transport
100191475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100191475
03041 Spliceosome [BR:
zma03041
]
100191475
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100191475
Spliceosome [BR:
zma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100191475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RNR-II_ins_dom
Motif
Other DBs
NCBI-GeneID:
100191475
NCBI-ProteinID:
NP_001337010
UniProt:
A0A1D6HLB0
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All DBs
Position
5:218466217..218472529
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AA seq
795 aa
AA seq
DB search
MAAAPTADAMDVDAPARTLTTSPATKLRSPHDLLAETRASIEKVAARILAIKKDGAPKSE
LRELVTQMSLHLVTLRQVNREILMEEDKVKAETEAAKAPVDSTTLQLHNLLYEKNHYVKA
IRACLDFQTKYPGIELVPEEEFQRSAPADILEKTLAADASHDLMLKRLNFELVQRKELCK
LHEKLGQQRGSLLETIANQKKFLSSLPSHLKSLKKASLPVQQQLGMQHTKKLKQHHAAEL
LPTPLYIAYTQLLGQKEAFGENIEVEIAGSTKDAQIFAQQQAKKENSTLSSGDNRMDDDV
IDDEEDAQRRRSRSKKNVVKEANNPAVAYQLHPLKIILHVYDTEDSGSKRRKLITLRFEY
LAKLNVVCVGIEDSEGLDSNILSNLFPDDTGLDLPHQMAKIYVGEVPNFSDKDSRPYKWA
QHLGGIDFLPEVPPSVGDDSSRALNTADLSSGLALYRQQNRAQTILQRIRLRKVAQMALM
WQLDYLTKLKWPRIEHKNAPWASRNPLCSLHSWSLTSYPESSRSILMLSGAASNVDSDVE
RSVTNWEETESIREDGELPVVIPAENEPNGSTILQPEVSAEIRSHSRGLSLISKSATPSK
LSISRSFGRNEDDLDLLMYSDSELEDQPCILDETEKATSPIRDRFWEEYASKEFTMVLSK
TMKNGLKVMLEAKVKISMEYPLRPPLFRLRLLSEKSEILKWHNDLRAMEAEVNLHILRSI
PLSYEDYILTHQVMCLAMLFDMHFDEENEKRKVTSVIDVGLCKPVSGTMLTRSVRGRDRR
QTIYWRGADCSSSYL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgccgactgcggatgccatggacgtcgacgcgccggctaggacgctgact
acctctccggccaccaagttgcgctcccctcacgacctcctggcagagacacgcgcctcc
atcgagaaagtcgcagcccggatactcgccatcaagaaagacggcgcccccaagtcggag
ctccgcgagcttgtcactcagatgtctctgcacctcgtcacgctacgccaagtgaacaga
gagatactgatggaggaggacaaggtcaaggcggagacggaggccgcgaaggcgccggtg
gactccacgacgctgcagctgcataacctgttgtacgagaagaaccactacgtgaaggcc
ataagagcgtgtcttgactttcagacgaagtatccggggatagagcttgtgcccgaggag
gagttccagcgttccgcgcccgcagacatccttgagaagaccctcgctgccgacgcctcc
cacgacctcatgctcaagcgcctcaactttgagctcgtccagaggaaagagttatgcaag
ctacatgagaaattaggacaacagaggggcagcttgctggagacaattgctaatcagaaa
aagtttctttcaagcctgccatcacatttgaaatcattgaagaaagcatcactgccagtg
cagcaacagttggggatgcaacataccaagaaactaaagcagcaccatgctgctgagtta
cttcctactccgctttatatagcatacactcagctgctagggcagaaagaagcatttgga
gagaatattgaagtagagatcgcgggaagcacaaaggatgcccaaatatttgctcaacaa
caagccaagaaggaaaacagcactctttcaagtggcgacaacagaatggatgatgatgtg
attgatgatgaagaagatgctcagagaagaagatcaagatccaaaaagaatgtggtgaag
gaagctaataatccagcagtggcctatcaacttcacccacttaaaattatacttcatgta
tatgatactgaagattctggtagcaaacgccgtaaactcatcaccctgaggtttgaatac
ttggcaaagttgaatgttgtttgtgtcggaattgaagattcagagggtctggacagtaat
atcttgtccaacctatttccagatgacactggtttagatctgcctcaccagatggctaag
atttatgttggggaggttccaaacttcagcgacaaggattcaaggccatacaagtgggca
caacatttaggtggtatcgactttttgcctgaagtgcctccatctgttggggatgattct
agcagagcattaaacactgctgatttgtcatctgggcttgctctgtaccgtcagcagaac
cgtgcacagactattttgcagaggatccgcttgcggaaagttgcacagatggctcttatg
tggcaacttgattatttgacaaagctgaagtggcctcgaatagaacataagaatgcacca
tgggcatcacgcaacccactgtgcagtctacatagttggtcattgacaagttatcctgag
tcatctcgttctattttgatgctaagtggtgctgcaagcaatgttgacagtgatgtagag
agatctgtgacaaactgggaagaaactgagagtatcagggaggatggggagcttccagtt
gttattcctgctgagaatgagccaaatggttctacaattttgcaacctgaggtgtcagct
gagatccggagccattctagaggcttatctcttatatcaaagagtgcaacaccatctaag
ctaagcatctcacgaagttttggtagaaatgaggacgatcttgatctcttgatgtatagc
gacagcgagttggaggaccagccctgcattcttgacgaaactgaaaaagctactagcccg
attagagacagattctgggaggagtatgcttccaaggaattcaccatggtcctgagtaaa
actatgaagaatggtctaaaagtcatgctggaagccaaggttaagataagtatggagtat
cctcttagacctccccttttcagattacgtttgctctcagaaaagtctgaaattttgaag
tggcacaatgatcttcgtgcaatggaagctgaggtaaatcttcacatccttcgaagcata
cctctatcatatgaggattatatattgactcaccaagttatgtgcctggctatgctgttt
gacatgcattttgatgaggaaaacgagaaaagaaaagtcacttcagtgatcgatgttggt
ctttgcaaacctgttagtggaactatgcttactagatcggttaggggtagagacagaagg
caaactatttattggagaggtgctgattgctcttccagttacttgtag
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integrated database retrieval system
