Zea mays (maize): 100191798
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Entry
100191798 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100191798
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100191798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100191798
03009 Ribosome biogenesis [BR:
zma03009
]
100191798
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100191798
Spliceosome [BR:
zma03041
]
Complex A
U2 snRNP components
U2 related factors
100191798
Complex B
100191798
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100191798
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
90S particles
Helicases
100191798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
100191798
NCBI-ProteinID:
NP_001130695
UniProt:
B4FA70
LinkDB
All DBs
Position
1:51179197..51183641
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AA seq
557 aa
AA seq
DB search
MLLREAMADPLLEKYKVIVLDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK
FQGYFNGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVMQIHMCEPAGDILVFLTGEE
EIEDACRKINKETNNMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPAPLKEGGPPGRKIVV
STNIAETSLTIDGIVYVIDPGFSKQKVYNPRIRVESLLVSPISKASAHQRAGRAGRTQPG
KCFRLYTEKSFNEDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA
LEVLNYLGALDDEGNLTQLGEMMSEFPLDPQMSKMLVISPKYNCSNEILSVSAMLSAPNC
FLRPRDAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPQWCYENFVNSRALKSADN
VRQQLVRIMTRFNLKMCSTDFNSREYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVV
HLHPSNCMDHKPEWVIYNEYVLTTRNFIRTVTDIRGDWLIDIAPHYYDLSNFPSCEAKRV
LERLYNKRERERAANRG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgagagaagcaatggcagacccacttttagagaagtacaaggtgattgttctt
gatgaggctcatgagaggactttagcaacagatgttctgtttgggcttctgaaggaagtt
ctaaaaaatagaccagatttgaagcttgttgttatgagtgctaccctcgaagcagagaaa
ttccagggttacttcaatggtgcacccttgatgaaggtgcctgggagacttcatccagtt
gagatattttacacccaagaaccagagagggactacctagaggctgctatcaggacggtt
atgcaaatacatatgtgtgaacctgctggtgatatccttgtattccttacaggagaagag
gagattgaggatgcatgccggaaaatcaacaaggaaactaataatatgggagatcaggtt
ggcccagttaaagtcgtgcctttgtactccacactgcccccagccatgcagcagaagatt
tttgaacctgctcctgccccattgaaggaaggaggtcctcctggaaggaaaattgttgtg
tccaccaacattgctgaaacatccttaactatagatggcatagtttatgtgatagacccg
gggttttccaaacagaaagtttacaacccaagaataagggtggaatcccttctggtgtca
cccatttctaaggcaagtgctcatcagagagctggtcgtgctggacgaacacaacccggg
aagtgttttaggctatacacggagaagagttttaatgaggatttgcaaccacagacatac
ccagaaattcttcggtcgaacctggcaaatacagttcttaccttgaagaaacttggaatt
gatgatttagtgcattttgactttatggatcctccagcaccagaaactctaatgagggcc
ttagaagttttgaactatttgggtgcactagatgatgaaggtaatctgacacagttaggt
gagatgatgagcgagtttcccctggatccacaaatgtcgaagatgctcgtcatcagtcca
aaatacaactgttcgaatgaaatcttatcagtatctgccatgctgtcagcacccaattgc
ttcctccggcctagggatgctcaaaaggctgctgatgaggcgaaggctcgatttggccac
attgacggggaccatctgacgcttctgaatgtataccatgcatacaaacaaaacaatgaa
gatccccagtggtgttacgagaactttgtcaattcaagagcacttaagtctgcagacaat
gtcagacaacagcttgttcgcatcatgactagattcaacctcaagatgtgcagcacggat
ttcaatagccgtgagtactatgtcaatatcaggaaagccatgcttgcggggtatttcatg
caggtcgctcacctggaacgaactggacattacctgactgtaaaagataaccaggtcgtc
catcttcatccctccaattgtatggaccataaaccagagtgggtcatctataatgaatat
gtcttgaccaccaggaatttcattcgcacagtcaccgatatccgtggggactggctaatt
gatattgcgccacattactatgatctgagcaatttcccgtcatgtgaggccaagcgtgtt
cttgagaggctgtataacaagcgagagagggaaagagctgcaaatagaggctga
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