Zea mays (maize): 100192058
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Entry
100192058 CDS
T01088
Name
(RefSeq) putative RING zinc finger domain superfamily protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100192058
04121 Ubiquitin system [BR:
zma04121
]
100192058
Enzymes [BR:
zma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100192058
Membrane trafficking [BR:
zma04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100192058
Ubiquitin system [BR:
zma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100192058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_1
Anti-TRAP
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
100192058
NCBI-ProteinID:
NP_001130953
UniProt:
B4FB62
LinkDB
All DBs
Position
5:complement(27112484..27117931)
Genome browser
AA seq
385 aa
AA seq
DB search
MSTPAAAYYAAAARKQYFCYQCNRTVLIAASAAAAGELSCPECHGDFLEEVTVPAPTFIP
LPFPFPFAPTTIPAASTTPAPAPAAGSGGSPSLSSSSSSAATSPSQPNDISSILNSFLGL
GEQPIRVGGSASRAAAGTATPENEPEPFDPVMFFQNYIHSLVEGGANIQVLLDDASVTLG
SGPGLGRIGGASFGDYFVGPGLEQLIEQLAENDPNRYGTPPAAKSVLSSLPDVLVTHAMV
AAAEGAECAVCKEDFSPGEVAKQMPCKHIYHTDCIVPWLELHNSCPICRFELPTDDPDYE
GRKGTNPQPAVGVAAAASGSSTAAEGQMEERQENPRVVERRFNVSLPWPFSGLGGQTSQQ
DGNSGGSGSNSQGNAQDGDPPSNKN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccagccgccgcctactacgccgccgccgcgcgcaagcaatacttttgctac
caatgcaaccgcaccgttctcatcgcggcctccgccgccgccgccggggagctctcgtgc
cccgagtgccacggcgacttcctcgaggaggtcaccgtccctgcccccaccttcatcccg
ctgcccttcccgttcccctttgcccccaccacgatccccgccgccagcaccaccccggcc
cccgccccagcagccggctccggtgggtccccttccttatcgtcctcgtcctcttccgcc
gcgacctccccttcccagcccaacgacatctcctccatcctcaactccttcctgggacta
ggcgaacaacccatcagggtcggcggctctgcctcgcgcgccgccgccggcacggccacc
cccgagaacgagcccgagcccttcgacccggtcatgttcttccagaattacatccatagc
ctcgttgagggaggcgccaacatccaggtcctcctcgacgacgccagcgtcaccctcggc
tccggacccggcctcgggcgtatcggcggggcaagctttggggattacttcgtcggccca
ggcctcgaacaactcatcgagcagctcgccgagaacgaccccaaccgctatggcacgccg
ccggctgccaaatcggtcctctcctcgctccccgacgtcctcgtgactcatgccatggtc
gcagctgcggagggcgctgagtgcgccgtctgcaaggaggatttctcgcctggagaggtg
gccaagcagatgccctgcaagcacatctaccacactgactgcattgtgccgtggcttgag
cttcacaactcgtgccccatctgccgatttgagctgcctactgacgatcctgattacgag
gggcggaagggcactaatcctcagccggctgttggtgtggctgctgctgcatctgggagc
tctactgctgctgagggacagatggaggagaggcaggagaatccaagggtggttgagagg
aggttcaatgtgtcgctgccgtggccattcagtggactgggagggcaaacatcgcagcag
gatgggaacagtggaggcagtggtagcaactcacaaggaaatgcacaggatggtgaccca
cccagcaacaagaattga
DBGET
integrated database retrieval system
