Zea mays (maize): 100192488
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Entry
100192488 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100192488
KO
K14406
cleavage stimulation factor subunit 1
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100192488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100192488
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100192488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Cytochrom_D1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
RMC1_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100192488
NCBI-ProteinID:
NP_001131180
UniProt:
B4FBI9
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Position
1:284303480..284310718
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AA seq
424 aa
AA seq
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MNEAVQEAKLLRQVNALIVAHLRSQNLGQAAAAVAAATMTPISAAESVPANHLLRLVAKG
LAAEHGGGDAASAFDSAGFGVAVQPPGSSAVDFSIQDVKGSSKSFPKHEVKHVSDHKNAA
RCVKFSPDGKYFATGSADTSIKFFEVAKIKQTMVGDSKDGPARPVVRTFYDHTQAINDLD
FHPESPILISAAKDSTIRFFDFSKTNARKAFRVIQDTHNVRSVCFHPCGDYLLAGTDHPV
AHLYDINTFTCYLSANAQDSSSPINQVRYSCTGSLYVTASKDGSLRIWDGVSAECVRPII
GAHGSSEAISAIFTKDERYVLSCGKDSRVKLWEVGTGRLVKQYAGAIRRQFRCQAVFNET
EEFVLSVDEQNNEVVVWDALTAEKVTRLPSGSTGAPRWLDHSPVEPVFVSCGNDRSIKFW
KQTV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggcggtgcaggaggcgaagctgctgcggcaggtgaacgcgctcatcgtggca
cacctccgtagccagaacctcgggcaggccgcagccgccgtcgccgccgccaccatgacc
cccatctccgctgccgaatccgtccccgccaatcacctcctgcgtctcgtggccaagggc
ctcgccgcggagcacggaggaggtgacgccgcttccgcattcgactccgccgggttcggt
gtggcggtgcagccgcccggctccagtgccgtggatttcagtattcaggatgtcaagggc
tcatccaaaagcttccccaagcacgaggtgaagcatgtctctgaccataagaacgctgcc
cggtgtgtgaaatttagtcctgatggaaagtattttgcaactgggagtgctgatacatcc
attaagttttttgaggttgctaagattaagcagactatggtaggagactctaaagatggc
cctgccaggcctgtggtacggacattttatgatcacacacaggccatcaatgatctggat
tttcatcctgagagtccaatactgatatcagctgcaaaagacagtacaataagattcttt
gacttttcaaaaaccaatgcgaggaaagcgttcagagttattcaggatactcataatgtt
agatctgtatgttttcatccttgtggggattaccttttagcagggactgatcacccagtt
gctcatttatatgatataaatacttttacatgctacttatcagcaaatgcacaggattct
agttctcccattaaccaggtacgctactcttgtactgggagcttgtatgtgactgcttct
aaagatggttctctgcgcatttgggatggagtatctgctgaatgtgttcgacctattatt
ggagcacatggatcatcagaagctattagcgcgattttcaccaaagatgagaggtacgtc
ctatcttgtgggaaagattctcgtgtcaagttatgggaagttggcactggacgacttgtg
aagcaatatgcaggagcaattcgcagacaatttcgttgtcaggctgtcttcaatgaaacc
gaggaatttgtgctatcagttgatgaacaaaacaatgaggttgtcgtctgggatgcactt
actgctgaaaaggttacaagattgccttctggcagcactggtgctcctagatggctcgac
cattccccagttgagccagtttttgttagttgtggaaacgatagatcgatcaaattctgg
aaacaaaccgtataa
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