Zea mays (maize): 100192719
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Entry
100192719 CDS
T01088
Name
(RefSeq) Small nuclear ribonucleoprotein F
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100192719
09123 Folding, sorting and degradation
03018 RNA degradation
100192719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100192719
03041 Spliceosome [BR:
zma03041
]
100192719
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100192719
mRNA degradation factors
5'-3' decay
Lsm complex
100192719
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100192719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
100192719
NCBI-ProteinID:
NP_001131392
UniProt:
B4FCE3
A0A804REI5
LinkDB
All DBs
Position
10:complement(112104190..112112388)
Genome browser
AA seq
95 aa
AA seq
DB search
MSSGGADKPGSGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE
EYVNGQLKNKYGDAFIRGNNVLYISTTKRTLADGA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgagctccggcggcgcggacaagcccggcagtggcggcggcgcggtgaagacgccgtcg
gacttcctcaagtccatcaggggccgccccgtagtcgtaaagctcaactccggcgtcgac
tacagaggtatattggcttgtctggatggttatatgaacatcgcaatggagcagaccgag
gagtacgtgaatggccagttgaagaacaagtatggcgacgccttcataaggggcaacaac
gttctgtacatcagcacgacgaagcggacccttgccgatggcgcgtag
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