Zea mays (maize): 100192745
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Entry
100192745 CDS
T01088
Name
(RefSeq) ubiquitin ligase protein FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
zma
Zea mays (maize)
Pathway
zma03460
Fanconi anemia pathway
zma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100192745
09124 Replication and repair
03460 Fanconi anemia pathway
100192745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zma04121
]
100192745
03400 DNA repair and recombination proteins [BR:
zma03400
]
100192745
Enzymes [BR:
zma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100192745
Ubiquitin system [BR:
zma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100192745
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100192745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_C
FANCL_d3
FANCL_d2
zf-RING-like
SLX1_C
zf-RING_2
RWD
zf-HC5HC2H
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100192745
NCBI-ProteinID:
NP_001131416
UniProt:
B4FCH1
LinkDB
All DBs
Position
5:9752833..9757217
Genome browser
AA seq
322 aa
AA seq
DB search
MDSPVPATLARAPARPQARAGEEACADTRQDAPAEAEPPPRRPAAFYSSVFAQIEEIGWK
QLVSATGDGVSCLTFRVVDEPGRMHLLEITLPMGYPESPPSISADVPYLPKIHWSKNSRL
KDVICQFQAHLKILQEFWNTMDEIDKVLWIVDPTKPSYAMSHRRIALGDDCYILLQVDAR
KPNSLPECRFLGTDGKLDQLIINWRKNRKKWDTKKKFHENLAAVLDFALPSPPSVGDKAK
DDEQADCGICYAKHLPVDDELGAHSGCATDYMCENPSCSRAFHSVCLRDWLRSITTTRQS
FDVLFGNCPYCSDPVAVKITGH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggactcgccggtgcctgctacgctcgcgcgcgcgccagcgagaccgcaagcgcgggcg
ggcgaggaggcttgcgcggatactcggcaggatgctccggcggaagcggagccacctccc
cgtcggccggccgcgttctacagctccgtgttcgcgcagatcgaagagatcgggtggaag
cagctggtgagcgccacaggagacggagtgtcctgtctcaccttccgcgtcgtggatgaa
ccaggacggatgcatttactggagatcacactgcccatgggctatcccgaaagtcctcct
tcaatctctgcagacgtaccatatctcccgaaaatacattggtcaaaaaactcaagactg
aaagatgttatttgccaatttcaagcgcacttgaaaatcttgcaagagttctggaatacg
atggacgagattgataaggtcctttggattgttgatccaacaaagccgtcttatgctatg
tctcatcgtcgtatagctttaggtgacgattgctacattttgttgcaagttgatgcacgc
aagcccaactccttaccagagtgtcgcttcttgggcacagatggcaaacttgatcagctg
ataataaattggagaaagaaccgtaaaaaatgggatacaaagaaaaaattccatgagaat
ttggcagccgtcttggactttgcactgccttcacccccttcggtcggtgataaagcgaaa
gatgacgagcaagctgattgtgggatatgttatgccaagcatctgccagttgatgacgaa
ctcggtgcccacagcgggtgtgcgacggactacatgtgtgagaaccccagctgcagcaga
gccttccattccgtgtgcctgagagactggttgcgctccatcaccacgactaggcagtcg
ttcgatgtcctgttcgggaactgcccctactgcagcgatcccgtcgccgtcaagatcacc
ggccactaa
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