Zea mays (maize): 100192923
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Entry
100192923 CDS
T01088
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zma01009
]
100192923
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100192923
Protein phosphatases and associated proteins [BR:
zma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100192923
Membrane trafficking [BR:
zma04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
100192923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
DUF7791
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
100192923
NCBI-ProteinID:
XP_020400458
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Position
10:103066183..103129311
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AA seq
988 aa
AA seq
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MASRPPLRTTSVASVFSSTDSSTSTGPPGGVPQSITALLNNPLPSSAASSYSWLSWPPTT
ITLPDAAPPPPSHPCEITRADFAPYLAAVSDPFARFADIRLHAHAELAASSDAEGAPAAS
SGLAACLREVPALFFKEDFALEDGPTFQAACPLDDDALQERLGQHLDVVEAHLVREIALR
SESFYEAQGRLRGLDGEIVTAVGRIRELREVVQVLTGDLVGAARQVQELNATRGNLVALQ
QKLTVILYVSQALTALKLLVAAADCAGALDVIDNLQNLLDTDELAGLYCFRHIRDQLGTS
LDSVNSILSAEFVHAAVPDGKAVDAMILSTVKRKASSPLNGTDHEGNIDEEESFILRDRL
LPLIICLLRTDKFPAVLRIYRDTLITVMKASIKATVAELLPVLTARPIDSDSVTGGRATD
ADAGGQSLANKLRSLSSEGFVQLLSAIFRIVQVHLQQAAEVKRIVEWIMGNLDETLSIDA
SNPTLQHGGSVIYDTQENDSSRGSNTLARSTSKIPFVQGKINDFSIISSIKNVRADVLRE
NTEAVFAACDAAHGRWAKLLGVRAGLHPRLRLEEFLIIYSITEEFIAATEKIGGRLGYNI
RGILQQQSKQFVDYQHNVRMTKIKAVLDQETWVAVDVPEEFQAIVLSLSSTYSSVNGMEM
PSTDDNSKFSDHQPTSQELTYSAENNADNGKVTSGTGENQVESTSQSANNVAGNLKSTLQ
TIVHGGVGYHMVNCGLILLKMLSEYVDISKCLPSLSLEVVQRVVEILKLFNTRTCQLVLG
AGAMQVSGLKSITSKHLALASQIISFIHSLIPDIRRVLFLKIPEARKQLLMSELDRVAQD
YKIHRDEIHSKLVQIMRERLLANLRKLPQIVEGWNAPQDNDVQPSQFAKAVTKEVTYLHR
ILSQTLLEVEVQTIFRQVVQIFHSHITEAFTKLEVSTPQAKDRLCRDVQHILACIRKLPA
DNFSSETIPNYGLLDEFLAENFGTKVGE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccgcccctccgcactacctccgtcgcctccgtcttttcctccaccgac
tcctccacttccaccggcccccccggtggcgtcccgcagtccatcaccgcgctcctcaac
aacccgctcccctcctccgccgcctcctcgtactcctggttgtcgtggccgcccaccacc
ataacgctacccgatgcggctccaccgccgccgtcgcacccctgcgagatcacccgcgcc
gacttcgcaccctaccttgccgccgtctccgaccccttcgcgcgcttcgccgacatccgc
ctccatgcccacgccgagcttgccgcctcttctgacgccgagggcgcccccgcggcctcc
tccggcctcgccgcctgtctccgtgaggtgcccgcgctcttctttaaggaggacttcgcg
ctcgaagacgggcccaccttccaggccgcctgcccgctcgacgacgatgcgctgcaggag
cgcctcggacagcacctcgacgtcgttgaggcccaccttgtgcgggagatagcactccgg
tctgagtccttctatgaggcgcagggccggctgcgcgggcttgatggggagatcgtcacg
gcggtagggaggatccgcgagctcagagaggtggtccaggttctcacgggggacctcgtc
ggggcagcgaggcaggtgcaagagctcaatgctacccgaggcaaccttgtggcgctgcag
cagaagctcactgtcatcctctatgttagccaggcgcttaccgcgctgaagctgcttgtt
gcagctgcagattgtgctggtgcactcgatgtcatcgataacttgcaaaatctgctagat
actgatgaacttgctgggctttattgctttcggcatattcgagatcagctgggaacatca
ctagattccgtgaacagcattctttcagcagaatttgtgcatgctgctgttcctgatgga
aaagctgtagatgctatgattttatcaactgtgaaaagaaaggcttcgagcccattgaat
gggacagaccatgagggtaacatagacgaggaggaaagttttattctcagggaccggctc
ctccccctcattatttgcctactgagaacggacaaatttcctgcagttctcagaatttac
cgggatacacttataactgttatgaaagcttcaatcaaagcaacagtagcggaattactc
cctgttttaactgccagaccaatagattctgattcagtaactggaggcagagctaccgat
gctgacgctggaggccagtccttggcaaataagttgcggagtctttcatctgaaggattt
gttcaacttttatctgccattttcaggatagtacaggtacatttacagcaagcagctgaa
gtgaaaagaatagttgagtggatcatgggaaaccttgatgaaacattaagtattgatgct
agtaatcctacattacaacatggtggttcagttatttatgatacccaagagaatgactct
tcacggggctctaatactcttgcacggagtacttccaagatcccatttgtccaaggaaaa
ataaatgatttttccattataagttcaataaagaatgttcgggctgatgtcttgagagaa
aacactgaagcagttttcgcggcttgtgatgctgcccatggacgatgggctaagctacta
ggtgttcgtgctggattacatcccaggttaaggcttgaagaattcttgatcatctacagc
ataacagaagaatttatagctgctacagaaaagattggaggcaggttgggttacaacatt
cgtggaatcctacaacaacaatcaaagcaatttgttgattatcagcataatgttcggatg
acaaaaatcaaggcagttcttgaccaagagacgtgggttgctgtggatgttcctgaagag
tttcaagcaatcgttctttcactttcatccacttactcttctgttaatggcatggagatg
cctagcactgatgataactcaaagttcagtgatcatcagcctacaagtcaagaactgaca
tattctgctgaaaataatgctgataatggcaaagtaacatccgggactggtgaaaaccag
gttgaatccacttctcagagtgcaaataatgttgccgggaatctgaaatccaccttgcaa
acaattgtacatggaggtgttggctatcatatggtaaactgcggtttgatactgttgaag
atgttatctgaatatgttgacatcagtaaatgtttaccatcactatctttggaggtggtc
caacgtgttgtggaaatattgaagcttttcaacactaggacttgccaacttgttctcggt
gcaggggccatgcaggtgtctggacttaaatcaattacatctaagcatttagctctggcg
agtcaaatcattagttttatacattctttaattccagatatcagacgagtgcttttcctg
aaaatacctgaagcacgcaaacagttgctaatgtctgagctggatagagtggctcaggac
tacaagatccatcgcgatgagattcacagtaaacttgtccagatcatgagagagaggctg
cttgcaaatcttagaaaattaccccaaattgtggaaggctggaatgccccacaggataat
gatgtgcagccgagtcaatttgctaaagctgttacaaaggaagttacctatttgcaccgt
atcctttctcaaacactgcttgaggttgaggtgcaaacaatattcaggcaagtggttcaa
atatttcattcacatattacagaagcatttacaaaattggaagtcagtactcctcaggca
aaggatagattatgccgagatgttcagcatattcttgcatgcatccggaagttgccagct
gacaacttcagttcagaaactattccaaattatggtcttcttgacgaattcttggctgag
aactttgggacgaaagttggtgaatga
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