Zea mays (maize): 100192986
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Entry
100192986 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100192986
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zma03036
]
100192986
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100192986
microRNA pathway
RISC loading complex
100192986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Dicer_dimer
Helicase_C
ResIII
PAZ
dsrm
Cas3-like_C_2
DUF6976
Motif
Other DBs
NCBI-GeneID:
100192986
NCBI-ProteinID:
NP_001335082
UniProt:
A0A1D6GM51
B4FDD6
LinkDB
All DBs
Position
5:complement(20831097..20848197)
Genome browser
AA seq
1408 aa
AA seq
DB search
MTRAAAEAAGEVVVEEDLPPSCDPQTQARWYQLEALERALAGNTLVFLETGAGKTLIAVL
LLRRFAHRIRSSPPPSFAVFLVPTVVLVNQQAGVIKEHTDLRVAQFYGDMGVDFWNADTW
RGRIDGAEVLVMTPQILLDNLRHSIFRLRDIPLLIFDECHRATGNSPYACILKEFYHPQL
NSRPSDSIPTIFGMTASLIARNLALDKYSEEISEFENLMNAKVYTVASESALLQYIPIAT
TKIVEYDDYIVTSELYSHTIRCLNKLETKHLEILKGKLHGSPLENSEKRIKKLNAMFLYC
ISDLGVWLAAKAAEILQSNKESCVSFWGEELDEKLEGFVRNYVRDVYSDLSEIILKMTKR
GVQRHIGEDFAEDLQDGLLTSKVYFLIKSLMGYRHMQDLRCIVFVERVITSIVLEALLST
INQMSGWSVRYMASGRNCGLQHQSRNKHVEIVDSFRSGKVHLIIATQILEEGLDVPSCNL
IIRFDQAATVRSFIQSRGRARMQHSDYVLLVRRHVFQFCRGDVNALSKTQKFLKSGQIMR
EESQRLESTCCQPLLNTLCNEEFYGVESTGAIVTLNSSIQLINFFCSKLPSDEYFKPLPR
FKIDKALGTCTLHLPMSSPVQTIYAEGKVSIIKKVVCLKACRELHAVGALTDYLLPESSV
PCEDEPDIVVDKYKNGQPDYFPEQLVDNWSSFSRRGFYYCYMVSLEGCSKTTPAEIVLAV
KCDMGSDFISNSFKLWGVQDYLSFTMRYVGIIHLNQEQVIAARRFQTTILSLLISNDLSE
VSNYIKNLLEMPASPGAVYLLLPVVSGKIDWRSIKFSASEMPEATNMDMRHCYPCKDTGI
VQTKDGTFCSCMLRNSIVCTPHNGMFYAVCGFLDLNANSLLHRSDGSFLSYKTYFKERYN
LDLRCEDQALLEARKLVEVRNFLHKCNYKKEKERSGKSVVELPPELCIVVMSPMSAITLR
SFTFIPSIMYRIQCMLLSMNLKMQLGPSMQQFDIPALKILEALTTKNCQEEFSQESLETL
GDSFLKYITTQHFFVKYKHQHEGMLTKMKKNVISNAALCQLACSNNLVGYIRSEAFNPKT
WIVPGVGYDICDRSLRKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGMDIEFHKMP
IERVITIKAEEFINVKSLELLLDYSFNDPSLLMEALTHGSYQIAGTTPCYQRLEFLGDAV
LDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHVLHSSSALHKRMAD
YLDKFEQSFSGPSHGWEAGISLPKVLGDVVESIAGAIYIDAKHDKGVVWRSMKRILEPLV
TPDTLQNDPVKELQEFCDSKGYTLEYTVTRDNGVSSVVAEVRTEGTTYKATRTGFSKLDA
KKLAASSVLRDLKAADTKQYSANGISCT
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgccgccgccgaagccgccggggaggtggtggtggaggaggatctgccgcca
tcctgcgacccgcagacacaggcgagatggtaccagctggaggcgctggagcgcgcgctg
gccgggaacacgcttgtgttcctcgagacgggcgccggcaagacgctcattgcggtgttg
cttctccgccgcttcgcacaccgcatccgctcctccccgccgccctccttcgccgtcttc
ctcgtccccaccgtcgtgctcgtgaaccagcaggcgggcgtcatcaaggagcacacggac
ctccgcgtcgcccagttctacggcgacatgggcgtcgacttctggaacgcggacacctgg
cgcggcaggatcgacggggccgaggtgctcgtcatgacgccacaaatccttcttgataac
ctccgccacagcatcttcaggctgcgggacatcccgctcctcatcttcgacgagtgccac
cgcgccaccgggaattccccgtacgcctgcattcttaaggagttttatcatccgcaactg
aattctaggccatcagattccattccaactatatttgggatgaccgcttctttaattgca
agaaatttggcgcttgacaaatattcagaagaaatatctgagtttgagaatctcatgaat
gcgaaggtgtacactgttgccagtgaatcagcactattgcaatacattccaattgcgact
acaaagatagttgagtacgatgattatatcgtaacgtctgagttatatagtcatactatc
cgttgcttgaacaaattggaaacaaagcatttagaaatcctgaaggggaaactgcatggt
tcacctttggaaaattcagagaaaagaataaaaaaattaaatgcaatgttcttatattgc
atatctgatcttggagtatggctggcagcaaaggctgctgagattctacaatcaaataag
gaaagctgtgtgtccttttggggcgaagaattggatgaaaaacttgaaggatttgttaga
aactatgtcagagatgtatatagtgatctttcagaaattatattgaagatgacaaagagg
ggcgtacaacgacatattggtgaggacttcgctgaggatctgcaagatgggttattaaca
tccaaagtttattttcttatcaaatctcttatggggtataggcatatgcaagatttgaga
tgcattgtttttgtcgaaagagttattacaagcattgtgttggaggcccttctgtcaact
attaatcaaatgtctggatggagtgttagatacatggcatcagggcgtaattgtggtttg
caacatcagagtaggaataagcatgtggaaatcgttgattcatttcggagtggaaaggtg
catctgattattgccacacaaattttggaggagggactagatgtgccaagttgtaacttg
ataatccgttttgatcaggcagcaactgtacgcagctttatacagtcacgtggtcgagct
aggatgcaacattctgactatgttttactagttagaaggcatgttttccagttttgtagg
ggagatgtcaatgctctttctaagacacagaagtttctgaaaagtggacaaatcatgcgg
gaagaatctcagagattggaatctacttgttgtcagcctcttctaaacacactatgcaat
gaagaattttatggtgttgaatctactggagcaattgtgactttgaactctagtattcaa
ttgattaactttttctgctcaaagctaccatcggatgagtattttaaacctctaccaaga
ttcaaaattgacaaggcattaggtacatgtacgctgcatcttccaatgagcagtcctgta
caaacaatttatgctgaaggaaaagtttctataatcaagaaggttgtttgtctcaaggcc
tgccgggaattacatgctgttggcgctctcacagattatctcttgcccgaatcgagtgtt
ccatgtgaagatgaacctgatattgttgtggacaaatacaaaaatgggcaacctgactac
tttccagagcaattagtggataattggtcgtccttttctcgtcgtggcttttattattgc
tacatggtatcactggaaggttgttctaaaactactccagctgagatagtattagctgta
aagtgcgacatgggatctgacttcatctcgaactcattcaaattgtggggtgtgcaagat
tatttgagttttaccatgagatatgttggcatcattcatctaaatcaggaacaggtaatt
gccgcgagaagattccagacaacaattctttctttgcttattagtaatgacctttcggag
gtcagcaattatattaagaacttacttgaaatgccagcatctcctggagctgtgtatcta
cttctgccagtagtttctggaaaaattgattggcgtagcatcaaattctcagcctcggaa
atgcctgaagctactaacatggatatgcgacactgctatccttgtaaagatactggtata
gtgcagacaaaagatggcactttctgctcgtgcatgcttcgaaattctattgtctgtaca
ccacataatggcatgttttatgctgtttgtggctttcttgacttgaatgctaattcgctt
ctacatagaagtgatggcagtttccttagctacaaaacctattttaaggaaaggtacaac
cttgatttaagatgtgaagatcaagctctcttggaagctcgtaaacttgtggaagtgcgg
aactttctccacaagtgtaactataaaaaagaaaaagaaagaagtggtaagagtgtggtt
gaattgccacccgaactgtgcatagttgtcatgtcaccaatgtccgcaattactttgcgc
agcttcacatttattccttctataatgtatcggatccagtgtatgctcctttctatgaat
ttgaaaatgcaattgggtccaagcatgcagcagtttgatattccagcactaaagattctg
gaagcacttacaacaaagaattgccaagaggaattttcgcaggaatcattagagacactt
ggggactcttttctcaagtatattacaacccaacacttttttgtcaaatacaaacatcag
catgaaggcatgctaaccaagatgaagaaaaacgtgatctcgaatgcagctttatgtcag
ctggcttgcagtaacaatcttgtgggatacattcgaagcgaagctttcaatcctaaaaca
tggatcgttccaggggttggctatgacatatgtgataggagtctgaggaagctgaaaagt
aagagaattgcggattcagttgaggccttaatcggggcgtatctcagtactgctggtgag
caggcagcatatattttcttaaaatctttaggaatggatatagagtttcacaaaatgcca
attgagagggtaatcacaatcaaagcagaagagttcattaatgttaaaagtttggagcta
ttgcttgactatagtttcaatgatccttcattgttgatggaagcactgacacatggttca
tatcagattgctggcactactccatgttatcagcggctggagtttcttggggatgctgta
ttagatcatatttttactgattatttctaccatcagtaccctgaatgcactcctgaactg
ctgacagatctgagatctgcttctgtgaacaatagctgctatgctcatgcagcagtaaaa
gcaggattacataagcatgttcttcactcgtcatcagcactgcacaaaaggatggccgac
tacctggacaagtttgagcagtcattttcaggtccatcacatggttgggaagcaggcatc
agtctgcccaaggttctaggtgatgtggttgaatctatcgctggtgcaatttacatcgac
gccaagcatgacaaaggggtcgtttggagaagcatgaaacggatactggaacctcttgtg
acacccgacacccttcagaatgaccctgtgaaagagctccaggaattctgtgatagcaaa
ggttacactttggagtacacggtaactcgtgacaacggtgtatcctcggtggtcgcagaa
gtgcggaccgaagggactacgtacaaggccactcggacaggcttctctaagcttgacgcc
aaaaagttggcagccagttccgtgctccgtgatttgaaggctgcggacacaaagcagtac
tctgcaaatggtatcagttgcacttaa
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