Zea mays (maize): 100193154
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Entry
100193154 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100193154
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
zma
Zea mays (maize)
Pathway
zma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100193154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100193154
Membrane trafficking [BR:
zma04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100193154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
WDR55
TPR_VPS8_2
Beta-prop_EML_2
Clathrin
Beta-prop_EML
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_HPS5
TPR_Vps41
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40
WD40_Prp19
zf-RING_Vps41
zf_RING_Vps8
Beta-prop_RIG_2nd
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
100193154
NCBI-ProteinID:
NP_001345596
UniProt:
A0A1D6GZ36
LinkDB
All DBs
Position
5:74682718..74700608
Genome browser
AA seq
1916 aa
AA seq
DB search
MPASSSPAMASQHAPPRRELDLDAFLPSSPTSSGASDADPADDDHRRAVDDLLRLLSSSD
SDSDSEESSRIPSTSIQTLSRVQAPAPVAEPSPSPSPSASPSPRRSASALPSETLSSLVA
RTFSSNGASSSSKPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRSVSAPV
EKVLEEEGSGSEGSKEFLPTGSLEAEVEEKGDSEAVADATKQTAGGNVGAELGEDKQAEV
GGEENAEAIKLVEASPLDALAAEDSSGHEQGNDANLAETDQVGNQIEAVYEENEDDQTGG
DNHVQSGQGMDLIAIALEESSDDEHEFERSDSILQEQVESGSLIDKVIEDRVEQLEASRK
AENTEKKLKVSMKPLEWAEELEKRQASSGQHWEEGAAAQPMQLEGIGKGPPAIGYMQIEM
DNPVTRVMSSPSFRSDHGSPQVLAVHRSYIAMGTSKGAVIVIPSKYSIHQADDTDAKMLF
FWNQGEKTQSPVTAMCFNQQGDLLLVGYGDGHMTIWDVQKSAAAKVIYGEHTAPVVHACF
IRQSKAITGDSKGVVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLVMDESFGFS
NSSAQGNQTTSSSGGLGSMMGGVVGGVVGVDSGWKFFNEGSSPMEDGVVVMFIMHQHALV
VRLRTNIDHVDHIETFSRPDGAREGSIAYAAWKYTSYLNESSSVDEERVSWLALAWDRQV
QVAKFVKSKIFKHKEWKLDSSAVGVAWLDDQMLVVLNLRGQLCLFSKDGSELRRTTFVPD
GLLFDDTILHHAHFFNRFGNPERHFNSSVAVRGATVYILGPSFLTVSRLLPWKERIEALK
RAGDWMGALDMAMRLYDGQTQGVVDLPRTVDSIRDAIMPYLVELLLSYISYVFEYISIAL
PNHTGKGGESGVLIEADRSLLTQRDEQYARVGGVAVEYCVHIGRNDILFDTVFSKFAAAE
SGGMFLEVLEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFNQVV
RLCREHGLYGALIYLFNQGLNDFRTPLEELLSVVQNTNSKDDASSGYRMLVYLKYCFQGL
AFPPGHGIIPQSRLHSVREELLQFLLEESKPLTSEVFKGFNASCGKCLNICYLLWLDTEA
TLEVIKCAFVQDNFESRDELPSTVNTSASDNEDGIDAGRPEGQNAMVQNVVDAIIDIVGL
ENDVIRSVMGRTESELWPSEKDFGYLMEFVSFFVSHKRANASKRVVMHILTYLISSYDDT
RTRIQKEKEVLQLFNAVPRNDWNSDFVLNLCSDAHFYQACGLIFTARNQNLAALDSYMKD
KEEPFHAFIFIDKKLLELVDDEALSFHTTVISRFPELVKLSRECAFVLAIDHFCDKIQQI
LAELRSDRHSLFLFLKTAIEVHLSGKLDFSKLELRNKQTVELQYSSTEVEAYQQRLSNLS
KLCHNPVYIDDELVELYLELLCQYERRSVLKFLETFDSYRLERCLHLCLDYGVTDAAAFL
QERVGDVGSALDLILAGLDEKISLFISSVESTFSGVASKSIAEIKQPDIVLEMSEAHPVL
DALHASIGLCQRNSQRLDPEESQSLWFQLLDSFSEPLKKLYGIKDVNGKGVKSNWSEASM
EHLKEKGLSQQMRISTKQKCLNVLRKVFSQCVGEIIEAMAGYIPLPAIMAKLLSDNGNQE
FGDFKLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFVCCICNC
SLSKEGAISAVRLFSCGHATHLQCESEQTRSSNQESKEGCPVCLSMSDTQARSKSPMFEN
GLMKYSGAEHEVSHGMYQIHEVDHAERSRGLQQMSRYEILNNLQKAQKSFHIETVPPLKL
APPAIYHEKIQKRTTSVGETSKHSVRSQKPQKIWQMKEKKSKEAGSHHPQKSSFLR
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtcgtcgtcgccggcgatggcgtcgcagcatgcgccgccgaggcgggagctc
gacctcgacgctttcctcccgtcctctccgacatcctccggggcctcggacgccgacccg
gccgacgatgaccaccgccgcgccgtcgacgacctgctccgcctcctctcctcctcagac
tcggactccgattccgaggagtctagccgcatcccaagcaccagcatccagacgctatcc
cgagtccaagccccggcgcctgtcgctgagccctcgccgtcgccttccccatccgcgtcc
ccgtccccgaggagatccgcatcggccttgccgtcggagaccctctcctccctcgtcgcg
agaaccttctcgagcaacggcgcttcctcgtcgtcgaagcccctcccctcgctcttccgg
ggcgtccgccccagccccaaacccggcgccgcgcttgccgctgctgccgcagcgtcccgc
gcggtcctcaccccacacgccgctgccatcaagtcgcgccgatcagtatcggcgcccgtg
gagaaagttctggaggaagaggggagtggctccgaaggctccaaggagttccttcccact
gggagcttggaagcagaggtagaagagaagggtgattcggaagcggttgctgatgcgacc
aagcaaactgcaggtgggaatgtgggtgcggaactgggagaggataaacaggcagaagtg
ggaggtgaagagaatgctgaggctataaagctggtggaggcaagtcctctggatgctcta
gctgcggaggattccagtgggcatgagcaaggtaatgatgccaatttggcggaaactgac
caagttgggaatcagattgaggctgtctatgaggaaaatgaggatgaccaaactggaggt
gataatcatgttcaatcaggtcagggtatggatcttattgcgattgctttagaggaaagt
tctgatgatgaacatgaatttgaaagatctgacagtatcttgcaagaacaagtggaatct
gggagcttaattgataaagtgattgaagatagggtagagcagctggaggccagcaggaag
gctgagaacacagagaagaagctgaaggtgtcaatgaaaccgttggagtgggcagaggag
cttgagaagaggcaggcctcgtctggtcaacattgggaggaaggagcagctgcgcagccc
atgcaactagagggaatcggaaagggcccaccagctatcggttacatgcaaattgagatg
gacaatccagtaacccgtgtcatgtcctcaccgtcatttaggtcagaccatggctctccc
caggtgctggctgttcataggagctatatagcaatgggcacatctaaaggtgctgtcatc
gtcattccaagcaaatactccattcatcaagctgatgatacagatgcaaagatgctgttc
ttttggaaccaaggcgagaagactcaatcaccagtgactgccatgtgctttaaccagcaa
ggggaccttctgctagtaggatatggtgatggtcatatgacaatttgggatgtacagaaa
tctgcagcagcaaaagttatatatggcgagcatacagcaccagtagtgcatgcttgtttt
atccgccaatctaaagccatcactggggattcaaaaggggtagttctattgcacacattt
tccattatccccgtaattaatcgtttaactgtcaagggaactcagcgtctttttgatggg
aatactggaattgtgctctcagcctgtcctcttgtaatggatgaatcttttggttttagt
aattcatctgcccagggaaatcagacaacttcctccagtggtggtcttggcagcatgatg
ggtggtgttgttggaggcgtggttggagtagattctggatggaagtttttcaacgaaggc
tcttctccaatggaggatggtgttgtagtcatgtttattatgcatcaacatgctcttgtg
gttagactccgtaccaatattgaccatgttgaccatattgagaccttctctagaccagat
ggagcacgtgagggctccatcgcgtatgctgcgtggaaatatacatcatatttgaatgaa
tcgtcatcagtagatgaagaacgagtgtcatggctagcacttgcatgggaccgtcaagtg
caagttgcaaagtttgttaaatcaaagatatttaaacacaaagagtggaagcttgatagt
tcagctgttggtgttgcctggttagacgaccagatgttagttgtccttaatttgagaggg
caactctgtttattctctaaagatggcagtgagcttcgcagaactacctttgttcctgat
ggccttctttttgatgacaccatattgcaccatgcacatttttttaacaggtttggtaac
ccagagaggcattttaacagttcagtagcggtaagaggtgctacagtgtatattcttggg
ccatcttttctcacggtttcccgacttcttccatggaaagagcgaattgaagcactaaag
agggctggcgattggatgggtgcactagacatggcaatgaggctttatgatggtcagaca
cagggtgttgttgatctcccaagaacggttgattctattagagatgccataatgccttac
ttagtagagttgctgctatcatatataagttatgtttttgaatatatttcaattgcgctg
ccaaatcatactggaaaagggggagaatcaggtgttctaatagaggcagatcgatccctg
cttacacaaagagatgagcagtacgctcgtgtaggaggggttgcagttgagtattgtgtc
cacattggacggaatgatatccttttcgatacagtcttctctaagtttgctgctgcagaa
agtggaggtatgtttctggaggtgctagagccttatatattgaaggatatgcttggttct
ctgccccctgagattatgcaagcactagtggagcattatagtggcaaagggtggttgcaa
cgagttgaacaatgcatccttcacatggatatttcttcattggactttaatcaggtagtc
agactttgtcgtgaacatgggctatatggtgcactaatttatttatttaaccaaggcctg
aatgatttccgtacaccactagaggaacttctatcagtcgttcagaacaccaacagtaaa
gatgatgcttctagtggatacaggatgcttgtttatctgaaatattgctttcagggtttg
gcatttcctccagggcatggaataattccccaatcccggcttcattcagtgagggaagaa
ctccttcaatttctgcttgaagaatctaagccactcacttctgaagtatttaagggtttc
aatgcttcttgtggaaagtgcctaaacatatgctatctgctatggttggatactgaagct
actttggaagtcatcaaatgtgcttttgtacaggataactttgagtctagagatgaactt
ccgagtactgtcaatacatctgcttcagataatgaagatggtattgatgctggaagacca
gagggccaaaatgctatggtacaaaatgtggttgatgccatcattgacatagttggtttg
gaaaatgatgtgattcggtctgttatgggtagaactgaatcagaattatggccttcggag
aaggattttggctatttaatggagtttgtgtccttttttgtttctcacaaaagggctaat
gcatctaagagggttgttatgcacattcttacttatctcatttcgtcatatgatgacaca
agaacaaggattcagaaagaaaaagaagttcttcaactcttcaatgcggttccccgaaac
gattggaattcggattttgtcttgaacctttgttcagatgctcatttttatcaggcctgt
ggtttgatatttacagccaggaatcagaatttggctgctttagatagttacatgaaggat
aaagaggaacctttccatgcttttatcttcattgataagaagttactagaattggttgac
gatgaagctttgtcgtttcataccacagtaatatctcgctttcctgagctagtcaagcta
agcagggaatgtgcatttgtcttggcgattgatcatttctgtgataagatacagcaaata
ttagcagagcttcgttctgaccgacacagcctctttcttttcttgaaaactgctattgaa
gtacacttgtctggaaaacttgacttcagtaagcttgaattaagaaacaaacaaactgtt
gaactccagtactcttctactgaagttgaagcttatcagcagaggctatcaaatctctcc
aagttatgccacaatcctgtttacatcgacgacgagttagttgagctttatctggagctt
ttatgtcagtatgagcgaaggtcagttctgaagtttctggagacttttgacagttacaga
ttggaacggtgcttgcatctttgcctagattatggagttacagatgctgctgctttcttg
caagagagggttggtgatgttgggagtgcccttgaccttattctggctggacttgatgag
aaaattagcttatttatctcttctgtggaaagtactttctctggcgtcgcatcaaaaagt
atcgctgaaattaagcaaccagacatcgttctagaaatgagtgaggctcatccagtgctt
gatgcattgcatgcctccattggattgtgccaaaggaattcacagcgcttggacccagag
gaatctcagtccctttggttccaactccttgactccttctcagagccattaaaaaaactg
tatgggatcaaggatgtaaatggaaaaggtgtcaagtccaattggagtgaagcatcaatg
gaacatctgaaggaaaaaggactatctcaacaaatgaggatttcaactaaacaaaagtgc
ctaaatgttctgcgaaaagtattttcacaatgtgttggagaaataatagaggccatggct
gggtatattcccctaccggcaatcatggcaaaactgttatctgataatgggaatcaagag
ttcggtgatttcaaacttgtgatacacagaatgttatctatgtatctttacgaaaaaaga
atactggaaacggctaagtcagtaattgaggatgactcattttacaccttgagcttatta
aagagaggagtttgtcatgggtttgccccacagactttcgtatgctgcatatgcaactgt
tcactttctaaagaaggtgctatttcagccgtacgtttgttcagttgcgggcatgcaaca
catcttcagtgtgagtctgagcagaccaggtcatccaatcaggaatccaaagagggatgc
cctgtttgtctctcaatgagtgatacgcaagctcgaagcaaatcacctatgtttgagaat
gggctaatgaagtattctggggctgaacatgaagtgtcacatggcatgtatcagattcat
gaagttgatcatgctgagagatctcgtgggcttcaacagatgtcacggtatgaaatactg
aataatcttcagaaagcgcagaagtcctttcatatagaaaccgtacctccattgaaactt
gcaccgccagctatataccatgagaagatacagaagaggaccacttcggttggtgaaact
agcaaacattctgttagaagtcagaaaccccagaaaatttggcaaatgaaggagaaaaaa
tcaaaagaggctgggagtcatcatccacaaaagtcaagttttctacgttaa
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