Zea mays (maize): 100193338
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Entry
100193338 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100193338 isoform 2
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100193338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100193338
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100193338
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
100193338
NCBI-ProteinID:
NP_001131945
UniProt:
B4FEN5
A0A3L6FZE9
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Position
2:10874233..10879356
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AA seq
321 aa
AA seq
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MANIPHSFAGASPPSPSPMAGSSSGPAPGQAAKDKKMASAEQLVLELCDPELRENALLEL
SKKREIFQDLAPLLWHSFGTIAALLQEIISIYPSLSPPTLSPGASNRVCNALALLQCVAS
HPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVISFLLQTE
IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANMVVSLAD
QPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPATRRWLQQLLHN
VTGGGMGGAPQPGMDPMNMGM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacattccccactccttcgcaggggcctcgcctccgtccccctctccgatggct
ggcagcagcagcggccccgccccgggccaggcagccaaggacaagaagatggcgtccgcg
gaacagctggtcctggaactctgcgaccctgaactgcgcgagaacgctttacttgagctc
tccaagaaaagggagatttttcaagatcttgctccgctgctttggcactcatttggcaca
attgctgcgttactccaggagattatatccatttacccgtcactatcaccccccacactg
tcacctggagcatcaaaccgagtttgcaatgctcttgcacttctgcagtgtgttgcatcg
caccctgagaccaggatccttttcctaaatgctcatattccattgtacctgtaccctttc
ctcaacactaccagcaaaacgagaccttttgagtacctaaggcttactagcttgggggtc
attggtgctcttgtcaaggttgatgatactgaagtcatcagttttttgctgcaaactgaa
ataattcctctgtgcttgcgaaccatggagatgggtagtgagctatccaaaactgtggca
actttcatcgtccaaaagattcttctagatgatgttgggctgcgctacatttgcgccact
gctgagcgtttctttgccgtaggcagtgttttagcaaacatggttgtttcacttgctgat
cagccctccacaaggctgctgaagcacatcattcgttgttacctccggctgtcagataac
cctagggcttgtgctgcattgcagagctgccttccagacatgctcaaagatgggaccttc
aataactgccttagggatgatccagcgacaaggcgctggctccaacagctcctgcacaat
gtgactggcggaggcatgggaggtgctcctcaaccaggaatggatcccatgaacatggga
atgtga
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