Zea mays (maize): 100193430
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Entry
100193430 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100193430
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zma03016
]
100193430
Enzymes [BR:
zma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100193430
Transfer RNA biogenesis [BR:
zma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100193430
Prokaryotic type
100193430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100193430
NCBI-ProteinID:
NP_001132024
UniProt:
B4FF04
LinkDB
All DBs
Position
1:56688579..56693188
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AA seq
369 aa
AA seq
DB search
MISLKMEIPDRAWEDDPDGIALASFINSNLPDNVRVFSILPAQRSFDVRRECLYREYFYL
LPAEIIGIKDDYSSEEMQEHLSEFNKILKGFEGNHPFHNYTARAKYRKVLAGRHRRAKGA
SSALKSMSSDTGMAESSSEESTSPDHDEDLNISSIFDSGIPEDTRVNGILKLSEDRLQIQ
ARWLHEPDESDRLNASHFRDIITCSCGDLQTSSGIQFVELTICGVSFMLHQIRKMVGTAV
TVKRGLLPRDIIELSLAKFSRIVLPIAPSEVLVLKDNSFCTKSKGGRIVRPGIQSMNKSE
ATRKGVEEFYRAALLPEVAKFLDPSLPPWKEWLENLDRFSGIPGSQLDEVREAYRAWRDD
YDRAKMARN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccttaagatggaaatccctgatagagcatgggaggatgatcctgatggtatt
gctcttgccagcttcattaactcaaatttgccggacaatgtgagggtttttagtatattg
cctgcacaaaggagttttgatgtaaggagggagtgcttatatcgtgagtacttctatctt
cttcctgctgaaattattggaattaaagatgactatagctctgaagaaatgcaagagcac
ttgtcagaattcaacaaaatactgaaaggttttgagggaaaccatccattccataattac
actgcacgtgccaagtataggaaggttctcgcgggaagacacagaagggccaaaggagca
agctcggcgttgaagtccatgtcctctgacactggcatggcagaaagctcttctgaagaa
agcacttctccagatcacgatgaggacttgaatatttcatcaatctttgactctggtata
ccagaagacactcgtgtgaatggtattctgaagctttctgaggatcggctgcagattcaa
gctaggtggctgcatgagcctgacgaaagcgatagattaaacgcttcacatttcagagat
atcattacctgttcctgtggagacttgcaaacttcatcagggattcagttcgttgagttg
accatatgcggggtatctttcatgctacatcagatccggaaaatggttggaaccgccgtg
acggtgaagcgtggactactaccaagagacatcatagagctgtccctcgcgaagttctcc
agaatcgttctaccaatagccccttcagaggtcctggtcctcaaggacaacagtttctgc
acgaagagcaagggagggaggatcgttcgccccgggatccagtccatgaacaagtcggaa
gcaaccaggaagggggtcgaggagttctacagggcagcgctcctgccagaagtagcgaag
ttcctggacccctctctgccgccgtggaaggagtggctggagaacctggacaggttctcg
ggcataccgggttcgcagctggacgaagtcagggaggcgtatcgagcgtggagggatgat
tacgaccgagcgaagatggctagaaactag
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