Zea mays (maize): 100193488
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Entry
100193488 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100193488
KO
K12881
THO complex subunit 4
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100193488
09122 Translation
03013 Nucleocytoplasmic transport
100193488
03015 mRNA surveillance pathway
100193488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100193488
03041 Spliceosome [BR:
zma03041
]
100193488
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100193488
TREX complex
100193488
Spliceosome [BR:
zma03041
]
Complex C
Other components
EJC/TREX
100193488
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100193488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
100193488
NCBI-ProteinID:
NP_001132074
UniProt:
B4FF68
LinkDB
All DBs
Position
7:complement(23140085..23145354)
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AA seq
249 aa
AA seq
DB search
MSGGLDMSLDDLIKQSKSRPKDSPASLSGPARRAPHPARAAPYPPAAPKARAAADSPYGV
YSKHIAAIAPPPLAKARSLETGTKLHISNLDSGVTIEDVQELFSEVGELKRYSMNYDKDG
RSKGTVEVVFARKVDALDAIKRYNGVLLDGKPMNLELIGNNVEPPPMPPVIHSRPLQNYN
DIHSSMPQSQRGGQRRVPQGNGRGGRSSQSSGGRGQGKGRGQDRNRTTISAADLDAELDK
YHAAAVKEE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcctggacatgtccctggacgacctcatcaagcagtccaagtcccgaccc
aaggacagcccggcgtccttgtcggggcctgcccgccgcgcgccacaccccgcccgcgcc
gcgccctacccaccggccgctcccaaggcccgtgccgccgccgactcgccctacggggtc
tactccaagcacatcgccgcgatagcgccgcccccgctggccaaagcaaggtcgcttgag
acgggaacgaagctgcacatctccaaccttgactccggcgtcaccatcgaggatgtccag
gaactcttctcagaagttggggagctcaagcgttattctatgaattatgacaaggatggg
agatctaaggggactgtggaagttgtctttgcaaggaaagtggatgctttggatgctatc
aagagatacaatggtgttctacttgatgggaagccaatgaatctagagctcattggaaac
aatgtcgaaccacctcccatgccaccagtaatacacagtcgtcctttgcagaactataat
gatatccatagcagtatgcctcaatcccaaagaggtggtcagcgaagagtaccccaaggc
aacggtcggggtggacgcagtagtcaaagcagtggtggccggggacaggggaaaggccga
ggccaggaccggaatcgcaccaccatttctgctgcagatcttgacgccgaacttgacaag
taccatgcagcggcagtgaaggaggaatga
DBGET
integrated database retrieval system
