Zea mays (maize): 100193503
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Entry
100193503 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100193503
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100193503
03015 mRNA surveillance pathway
100193503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100193503
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100193503
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100193503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
100193503
NCBI-ProteinID:
NP_001132088
UniProt:
B6SLS0
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All DBs
Position
1:12231374..12236171
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AA seq
504 aa
AA seq
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MADKAASPEKKSWADVEEEEEAKAKATAAAEAAAAAAAASSSSSITEPAVEEQAKQIEAL
SLAPSVDDAAGEEGPPLLDDSDDSQIQAVISGGTVYESATTFEDLKLSPELLKGLHDEMG
FSRPSKIQAITLPMILTPPYKDLVAQAHNGSGKTTCFVLGMLSRVDPQRKIPQAICICPT
RELAQQNKAVLMRMGKFTGITCACAIPPAQKDYMPISKMAPITDQIVIGTSGTLIKWITH
KKLATRDIKILVFDEADHMLAEDGFRSDSERMMRDIQRSAGGCQVLLFSATFNDRVKDFV
TKVIRDGNQIFVKKEELTLEKVKQYKVQVPDESAKIEVIRDKIFEFGQKVGQVIIFVRTK
QSTKNVHNALTREDYVCSSIQGSLDQSEREKIIQEFKDGYTKVLISTDVLARGFDQAQVN
LVINYDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLLCGQTDNVVMKKIEDYFQH
SVPEVRNWQREEDFEAALKDAGLL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggcggcgtccccggagaagaagtcatgggccgacgtcgaagaggaggag
gaggccaaggctaaggcgaccgcggcagccgaagcggcggcggcggccgccgcggcgtcc
tcttcctcctccatcaccgagccggcggtggaggagcaggccaagcagatcgaggcgctc
tccctcgccccgtcggtggacgacgccgcaggcgaagagggcccgcccctcctcgatgac
tccgacgactcgcaaatccaagccgtgatttcgggtggcacggtgtacgagtcggccacc
acgttcgaggatctgaagctgtcgcccgagctgcttaaggggctgcacgacgagatgggg
ttcagccgcccgagcaagatccaggcgatcaccctgcccatgatcctcacgccgccctac
aaggacctcgtcgcgcaggcgcacaacggctctggcaagaccacctgtttcgtcctcggc
atgctcagccgcgtcgacccgcaacgcaagataccccaggctatctgcatttgccccacc
agggagcttgcgcagcagaataaggcagttctcatgaggatgggcaagtttactggcatt
acatgcgcctgtgcaatcccgccagctcaaaaagactacatgccgatctcgaaaatggct
ccgatcactgaccagatcgttatcggcacatctggtacgctcatcaaatggattacccat
aagaagctggccacaagggacatcaagatacttgtgtttgatgaggcagatcatatgctt
gctgaggatggctttaggagtgattctgaaaggatgatgagggatatacaaagaagcgct
ggtggttgtcaggtgcttctcttttctgcgaccttcaatgatagggtgaaggattttgtt
acaaaggtcattagggatggaaatcagatatttgtgaagaaggaagagcttactttggaa
aaagttaaacagtacaaagttcaagtacctgatgaatcggcaaaaatagaggttataagg
gacaagatatttgaatttggacagaaagttggccaggttatcatatttgttagaacaaag
caaagtactaagaatgttcacaatgctttgacgagggaggactatgtgtgctcctcaatc
caaggatcccttgaccaatcagagagggaaaagataatacaggaattcaaagatggctac
accaaggttcttatatcaactgatgttcttgctcgaggttttgaccaagcacaggttaac
ctcgtcatcaactacgacatgccaatcaaatttggtacaagagatgaacctgattatgag
gtgtacttgcacagaattggcagagctgggcgctttggccggaaaggtgctgtgttcaac
ttgctgtgtggtcaaaccgataatgttgtgatgaagaagatcgaggactatttccagcac
agtgtgcctgaggttcggaattggcaacgtgaagaagattttgaggctgctctcaaggat
gcaggtttactttaa
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