Zea mays (maize): 100193949
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Entry
100193949 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100193949 isoform 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
zma
Zea mays (maize)
Pathway
zma03022
Basal transcription factors
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100193949
09124 Replication and repair
03420 Nucleotide excision repair
100193949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100193949
03400 DNA repair and recombination proteins [BR:
zma03400
]
100193949
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100193949
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100193949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
100193949
NCBI-ProteinID:
NP_001304165
UniProt:
K7US08
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All DBs
Position
4:complement(35661258..35668880)
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AA seq
600 aa
AA seq
DB search
MGSMTIGAKYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEG
NKAALLNLSKEDKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGIVPPRPTVAPENSVASA
ALEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDEANKRSKQK
PGFKSALVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDFVPKKMSETRFWEK
YCRAEYLVRTKNTAAATAEAAGDEELAIFLKNDDILAKEAKLKIKRVDPTLDMEADTGDD
YIHLPDHGIHRDGSKETVDADSELARRTLSQDLNRHAAVVLEGRSLDVESTDPKTLAEAL
ARSKKEPPSTSNVDDDNHERLMKVARMTEIEDLQAPRSLLYAPLCIKDPREYFDSQQANA
LRSLGGSNGGRKAHSCSLSTEEVFHHLMDQMSSVKVNRLNCPIVQSDMALKVLNELNEGI
SRSRRLNLKNPQEGLLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLYNKVQRVK
EAMTQIYQKLQLIKELAQPDVRHEISRLVKPMTQALDAAFNHDLEQQQKSSKAGNRHNGF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatgacgatcggtgccaagtacaagaccacgatcaaggaccccggcaccccg
ggcatcctccgcatgaacggtgataggttcaccttcacccctaatgatccacgatcggca
atgaagttcaatgttgatttccgaaccatcaaaggtcacaagttcaataaagtagagggt
aacaaagcagcattattgaacctttcaaaagaagacaaggctggaggctacatatttgag
tttgacaatgttggtaaccgtgaccaatgtcgagactttgtagctagggttttaggcaaa
catcaagggatagtgcctcctagaccaactgtggctcctgaaaactcagttgcttctgct
gctctggaacaactcagtgccgcagaagtggagagacgggttaaactgttgcgagaagac
agcgaattgcagaaattacataagaagtttgttcttggaaatattctgcaagaatctgaa
ttttgggcaacaagaaagaatttacttgatgatgaagcaaataagagatcaaaacaaaag
ccaggtttcaagagtgcacttgtagatattaggccaacaactgatggtcggacaaacaag
gttactttccagatcacacctgagatgatacatcagatttttgcagaaaagcctgctgtc
cgtagagcatatttagattttgttccaaaaaagatgtcagaaacccgattttgggaaaaa
tactgtagagctgagtatctagtcaggacaaaaaacactgcagcagcaacagctgaggca
gctggagatgaggaattagctatcttcctgaagaatgatgatatactggccaaggaggca
aagttgaagataaaacgagtcgatccaacattagacatggaggcagacactggagatgat
tacattcatcttccggaccatgggattcaccgtgatggtagcaaagagacagtcgatgct
gacagtgagttggcgaggaggacgctgtctcaggacctgaaccgtcatgcagctgttgtt
cttgaagggagatctcttgatgttgagtcaactgatccaaagactttagctgaagccctt
gcaagatccaagaaagaaccaccttctacttctaatgttgatgatgataatcatgagaga
ctaatgaaggtggctagaatgacagagatagaggatctgcaagctccacgaagtcttctg
tatgcaccactttgtataaaggatcctagagaatattttgattcccaacaagcaaatgct
ctgagatctctaggtggcagcaatggtggaagaaaagcccatagttgcagcttgagcact
gaagaagtgttccatcatttaatggatcaaatgtcttctgttaaagttaataggcttaac
tgtccgattgttcagtctgatatggctcttaaggttcttaatgaattaaacgaagggatt
tctcgttcaaggagacttaacctcaagaatcctcaagaaggtctccttggtcagctgcct
caacatacacgggacgagcttatggatcattggacggctatccaggaattgctacgccat
ttttggtcatcgtatccaataacaagtgcagtactttataacaaggttcaaagagttaaa
gaagctatgacacagatatatcaaaagctgcagcttataaaggaattggcacagcctgat
gtaagacatgaaatatctcggctagtaaagcccatgactcaggccttggatgccgccttc
aaccatgatttggaacagcagcagaaatcgtccaaggccggaaacaggcacaacgggttt
tga
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