Zea mays (maize): 100194141
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Entry
100194141 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100194141
KO
K14327
regulator of nonsense transcripts 2
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100194141
03015 mRNA surveillance pathway
100194141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100194141
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100194141
mRNA cycle factors
P-body specific factors
100194141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
PsiA
Motif
Other DBs
NCBI-GeneID:
100194141
NCBI-ProteinID:
NP_001346331
UniProt:
A0A1D6Q5G1
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Position
4:complement(149434948..149453681)
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AA seq
1193 aa
AA seq
DB search
MDNAQSDNRTDTKQDDDARQSKQDDEEARLEEYKKIIDQKISLRRSNQNPERPDANYLRT
LDSSIKRNTTVIKKLKTINDEQKDVIMDELKSVNLSKFVSEAVSYICEAKLRSADIQAAV
QVCSLLHQRYKDFSPCLIEGLLKIFFPGKSGDDLDADKNSRAMKKRSTLKLLIELYFVGI
VEDASIFVNIIKDLTSAEHLKDREGTQTNLSLLSTFARQGKFFVGLQPHGQEAYDEFFKD
LNVTAEQKKFFKKALNSYYDAVAELLQSEHASLRLMEAENAKVLSAKGELSDENTSSYEK
LRKSFDQLLRGVSSLAESLDMQPPVMPDDGNTTRVTTGTDALPSSGKESSALEPIWDDED
TKAFYESLPDLRAFVPAVLLGEVEPKSNEQHVKGRELSGESTSEQETELHDNVPTSATER
QLEVKVDDLVKESEDRDKEKGKDGEKEKSKEKDLDKKNEREKEKGRVLDGASLDNLLQRL
PGCVSRDLIDQLTVEFCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDV
PSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFS
HHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCK
PPERSARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPWAECQQYLLKCFLKVHK
GKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRRLAHMRFLGEL
YSYKHIDSSVVFDTLYLIIVFGHGTPEQDVLDPPEDCFRIRLIITLLQTCGHYFSKGSSK
RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENER
SAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSID
GREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQEDFDREL
KALLQESLESRKSEARSRLPLNMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSK
VRVKVLMKKGHKQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNG
ASQMGNWGQGATSTSSIRSGGRGSWDGSARGGGRQRHHITGSGGFYHSYGRRR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgctcagagtgacaaccgaactgataccaagcaagatgatgatgcgcgccaa
agcaaacaggatgatgaggaggcccgccttgaagaatataaaaagatcattgatcaaaag
atttccctccgccggagcaaccaaaaccctgaaaggcctgatgcaaactacctgagaacc
ctggactctagtattaagcgcaatacaaccgttataaagaagttgaagacaataaatgat
gaacagaaggatgtgataatggatgagttaaaaagtgtgaatttgagtaaatttgtcagc
gaagcagtttcttacatttgtgaggccaaacttcgctccgctgatatacaagctgctgtt
caggtttgctcgctccttcatcaaagatacaaggacttctctccttgtcttatagaaggt
ctactgaagatcttctttcctggaaaatctggagatgatttggatgcagataaaaattcg
agagccatgaagaagagaagcacattgaaacttttgattgaactatattttgttggaatt
gtcgaagatgctagcatatttgtaaatattataaaagatcttacatcagcagaacatttg
aaggaccgtgaaggaactcaaacaaacctatctcttctatctacctttgctcgtcaaggg
aagttttttgtagggctacaacctcatggtcaagaagcttatgacgagttctttaaggac
ctaaatgttactgctgagcagaagaagttctttaagaaagccttgaactcttactatgat
gctgtagctgaactactacaatcagaacatgcgtctcttcgtctaatggaggcggagaat
gcaaaagttttaagtgccaaaggtgaactaagtgatgagaacacatcctcatatgagaaa
ctcaggaagtcttttgatcagttactacgtggtgtttcctcgttggctgaatctcttgac
atgcaacctccagtgatgccagatgatggaaatacaacaagagttactacaggaaccgat
gcgttgccttcttctggaaaagaatcatctgcattggaacctatctgggatgatgaagat
accaaagctttttatgaatctttacctgatctcagagcatttgtgccagctgtattactg
ggagaggttgaaccaaaatcaaatgagcaacatgttaagggccgtgagctatctggtgag
tccacttcagaacaagagactgaactacatgacaatgttccaacttctgccactgaacgt
caactagaagttaaagtagatgatctagtgaaagagagtgaagacagagataaagagaag
gggaaggatggagaaaaggaaaaatccaaggagaaggatctggataagaaaaatgaaaga
gagaaggagaaaggaagagtcttggatggcgcaagtctggataacctcctgcagaggctg
ccaggatgtgtcagtcgtgatctcattgatcaattgacggttgagttttgctacctaaat
tctaaagcaaatcgaaagaaacttgtgcgtgccttattcaatgttaataggacttcactg
gaactgttgccatactattctcgtttggttgcaacactctcaacctgtatgaaagatgtt
ccaagtatgcttctgtctatgcttgaagaggagttcaactttttaataaataagaaggac
cagatcaacatagaaacaaaaataaaaaatatacggtttatcggggagttgtgcaagttc
aaaatggctcctccagctcttgtttttagctgtttgaaggcctgccttgatgatttcagt
catcataatattgatgtggcttgcaaccttcttgagacttgtggtcgttttttgtatcgc
tcacctgaaactaccattcgcatggctaacatgctggagatactgatgagattgaaaaat
gtcaagaatttggattcacgccacagtacacttgtagaaaacgcctactacctttgtaaa
ccgcccgaaagatctgcgcggatatcgaaagttcggccaccgttgcatcaatacataaga
aagttgcttttctcagatcttgacaaatcaagtgttgaacatgttttgcgccaactacgc
aaattaccttgggcagagtgtcaacaataccttctgaagtgctttctaaaggttcacaaa
ggaaagtacagccaagttcatctgattgctcttctcactgctagtctcagccgctatcac
gatgactttgctgtctcagtggtagatgaggttttagaagagataagggttggattggag
ttgaatgactatgggatgcaacaaaggaggcttgcccacatgcggttccttggagagcta
tacagctacaagcatatagattcatcagttgtttttgatacactgtaccttatcattgtg
tttggtcatggaactccggaacaagatgtgctggatccaccagaagattgtttcagaatc
aggttgatcattacacttctacagacctgtggtcactatttcagtaaggggtcttcaaaa
aggaagctcgacaaattcttgctacactttcaaagatacattattagtaaagggccctta
ccactcgacatagagtttgacattcaggatttatttggtgagctacgaccaaccatgtct
aggtattcgtcaattgaggaacttgttgccgcgttagttgagtttgaagaaaatgaacgt
tcagccccagtagaaaaggttgaaaatgaaagacactccgacaatgaatctcagaaaaga
cactcgcgagatgctggtccatctgtgaatggtgaaagcgctgcaaatggaaccgaggaa
aatggcaaggctcatgaagtagcagatagtgagagctattcagatactggcagcattgat
ggacgggaagaagaggaggatatattatctgaggataaatcaaatgatggctcagataac
gaaggcgacgatgaagatgatggcattcctgttgtttctgatgaagatgaaaatgttgag
gttagacagaaagtcatgaatgttgatcctaaggagcaagaagacttcgatcgagagctc
aaagcccttcttcaggagagcttggagtctcgtaaatcagaggcccgttcaaggctccct
ttgaatatgatggtgccgatgaacgtcctcgagggttcaaaagactcaagggccacagaa
tctgagagtggagaagaaacagtagacgaagagggtgggaatgctgggggtagcagcaag
gtgcgtgtgaaggtgctaatgaagaaaggacacaagcaacagacaagacaaatgttaatt
ccggccgatagttcaattgtgcaaagcacgaagcagcaggaagctgctgagcttgaggag
aagcagagcatcaagcggaggatccttgagtacaatgagagggaggaagaattgaatgga
gcatcccaaatggggaactggggccaaggagctaccagtaccagcagtatcagatcaggt
ggccggggcagctgggatggttcagcacggggaggtggtcgacaacggcaccacataacg
ggttctggtggtttctaccacagttatggcaggagaagataa
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integrated database retrieval system
