Zea mays (maize): 100216679
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Entry
100216679 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100216679
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100216679
03036 Chromosome and associated proteins [BR:
zma03036
]
100216679
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100216679
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
100216679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_19
Lsm_interact
xRRM
Pox_A12
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
100216679
NCBI-ProteinID:
NP_001346407
LinkDB
All DBs
Position
6:complement(8886133..8894131)
Genome browser
AA seq
811 aa
AA seq
DB search
MPDAAVPSGSHSDSSDSDSDDEAATAAAELRIQALEKTLQEQPLDYETHVQYIQCLRKAG
NIEKLRVAREEMNKYFPLTPKMWQEWAKDEISLSSSEESFGDIEKIYGHGVQEYLSIKLW
RDYLDYVEEHDHSVSQCTPSGLSKMRNLFESAITAGGLHVTEGSKLWAAYREYEMAILIT
IADANDEEREKQVQRIRMLFHRQLSVPLADMESTLAEYKSWEAEQGNANDPGADFDGVPS
NVVSAYKKANDMYNERKQYEDQLSNAGTFEGDKLQQFMKYIKFEEASGDPARVQVLYERA
VSELPVSSDIWMGYTSYLDRTLKVPSVVRSVYYRATRNCTWVGELWVHYLLSLERIRASE
EELQHVFERAIQCTFSTIQEYFNIYLTRVHGLRRRISDGLDFQLIRQTLTDAAEFLSSQL
STKELLRLYAYWAKLELSLGKDLSAARGVWENAIKKSGSVFEVWEQYILMEIKMDHVHEA
RSLYKRCYSKRFAGSGSEEICYSWIRFEEENGTLDDYDLAVKKVTPRLKELMTFKSQEEA
KVEAYPNLNDNSNANDSSQKRKPSNNKQQPPAKKRKENPPKSTMPSDDQGSNVQSGHSGA
VTDVEVGGASREKVMASIEMKVDSDSRTGKSSSNEPKPSFYNDNCTVFVSNIDLKANEDD
LRRFFSDIGGATAIRLLRDRFTKKSRGLAYVDFLDNKHLEAAIKKNKQKLLGKKVSIARS
DPSKGKKSREAGQTSQDNLPPSGGDDAKATGSSGPDNEVPKGDAKTIGKNTLFAPRALVK
PLGWTNKDEKKPDVAGELKSNEEFRNLLLKK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgccgccgtgccgtcgggctcccactcggactcgtccgactccgactccgac
gacgaagccgccactgccgccgccgagctccgcatccaggccctagagaaaaccctacag
gagcagccactggactacgagacccacgtgcagtatatccagtgcctgaggaaggcaggc
aacattgagaagcttcgcgtggcaagggaagagatgaacaagtactttcctctaaccccg
aagatgtggcaggagtgggccaaggacgagatctcattgagctcgagtgaggaatctttt
ggtgacattgaaaagatctacgggcatggggtgcaggaatacctgtccatcaagttatgg
cgggattaccttgattatgttgaagagcatgatcattcagtgtctcagtgtacaccttct
ggcctctccaagatgagaaatttgtttgaaagtgctattaccgcaggtgggctccatgtt
actgagggcagcaagctatgggcagcctatagagaatatgagatggccattttgatcacc
atcgctgatgccaatgatgaggagagggaaaagcaagttcagcgtatacgcatgctattc
caccgccagttatctgttcctttggctgatatggaatctacacttgctgagtataagagc
tgggaggctgagcaggggaatgcaaatgatcctggtgcagattttgatggtgtcccctca
aatgttgtatctgcttacaaaaaggccaatgatatgtacaatgaaaggaagcaatacgag
gatcaactaagcaatgcaggcacatttgaaggtgacaaactgcagcaatttatgaagtac
atcaaatttgaggaggcttctggtgaccctgctcgtgttcaagttctgtatgagcgagct
gtttcagagcttcctgtttcaagtgatatatggatgggatatacaagttacctggataga
accctgaaggtgccttctgtagtcagaagtgtttattacagagccacaagaaattgtaca
tgggttggtgagttatgggtccattatttgttgtctttggagcgtattcgtgcttctgaa
gaagagctgcagcatgtatttgaacgggcaatacaatgtaccttttcaaccatacaagag
tatttcaatatttatcttactcgagttcatggtttaagacggaggatttctgatggcttg
gattttcaactgattaggcagacattaacggatgctgcagaatttctctcatctcaactg
agtaccaaggagttactgcgcttatatgcttattgggccaaactagagcttagtctcggc
aaagatctttctgcagctcgtggagtttgggaaaacgcgatcaagaaaagtgggtctgtt
tttgaagtttgggagcagtacattttaatggagataaaaatggaccatgtacatgaggcg
agatccctttataagcgttgttatagcaaaagatttgctgggtctggatcagaggagata
tgctactcatggataagatttgaagaggagaatggcaccttggatgattatgatcttgct
gtaaagaaggttacccctcggctaaaggagcttatgacattcaagtctcaagaggaggct
aaagttgaggcttaccctaacctcaatgataattctaatgcaaatgattcctctcagaaa
agaaaaccaagtaacaataaacagcagccccctgctaagaaaagaaaagagaatccacca
aaaagtaccatgccatcagatgaccaaggatcaaatgtgcaaagtgggcacagtggtgct
gttactgatgtagaagtcggaggggccagcagggagaaggtcatggcatctatcgagatg
aaagtggacagtgacagccgaacagggaaatcaagttcaaatgaaccaaagccatccttt
tataatgacaactgtacagtttttgtgtcaaatattgacttgaaagcaaatgaggatgat
ctcaggcgattcttctctgatattggtggtgccacagcaataagattgctgagggacaga
ttcaccaaaaaatcaagggggttggcctatgtggactttttagacaacaagcatcttgag
gcagctattaagaaaaacaagcagaagctgcttggaaagaaagtgagtatcgcgcgatca
gatccaagcaagggtaagaagagccgtgaagcaggtcaaacaagccaggataatttacct
ccgagtggtggtgatgatgcaaaagcaacaggatccagtggaccagacaatgaagtaccc
aagggtgatgcaaaaaccatagggaagaataccctttttgcaccacgagctctggttaaa
cctcttggatggacaaacaaggatgagaagaaaccagatgttgcaggggagttgaaatca
aatgaggagttccgaaatctgttactaaagaagtga
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