Zea mays (maize): 100217116
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Entry
100217116 CDS
T01088
Name
(RefSeq) pseudouridylate synthase isoform 2
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zma03016
]
100217116
Enzymes [BR:
zma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100217116
Transfer RNA biogenesis [BR:
zma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100217116
Prokaryotic type
100217116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100217116
NCBI-ProteinID:
NP_001136956
UniProt:
B4FLG8
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All DBs
Position
5:181371056..181377633
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AA seq
201 aa
AA seq
DB search
MNGLLPPEIRVREISAARPEFHARSSTKSKVYRYKIYNEAIMDPFHNHYAYHSAYKLNPH
AMQEAANYFVGIHDFTSFANAAHNDGERRPTKKITRFDVTEMGAVLQLEVEGTGFLYRQV
RNMVALLLQVGKEALPPDIVPAIIAARDRKELAKVALSAPPHGLYLMSVNYDEEILKPPE
GSPPISFGRTHHLSKCKLTLY
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatggactccttcctcctgagattcgagtcagggaaattagtgcagcacgtcctgaa
ttccatgctcgctcatccacaaagagcaaagtctatcgctacaagatctataatgaagca
atcatggatccctttcataatcactatgcttatcatagtgcttataaacttaatccccat
gccatgcaggaggctgcaaattattttgttggaatccatgacttcacgtcttttgctaat
gctgcacataatgacggtgagcgcaggcccacaaagaagataacacgttttgatgttact
gaaatgggtgctgtcttacagctcgaggttgaaggcaccggttttctgtacagacaagtg
aggaacatggttgctttgctgcttcaagtcggaaaggaagcacttcctcctgatatcgtt
ccagcgatcattgcggccagggaccgcaaagaactggcgaaggtggccttgtcagcacca
ccacatggattgtatctcatgtcggttaactatgacgaggaaatcctgaagcctcctgaa
ggttcccctccaatttcgtttggcagaactcatcatcttagtaagtgcaaacttacgttg
tattaa
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