Zea mays (maize): 100272259
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Entry
100272259 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100272259
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100272259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100272259
03110 Chaperones and folding catalysts [BR:
zma03110
]
100272259
03029 Mitochondrial biogenesis [BR:
zma03029
]
100272259
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zma04147
]
100272259
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100272259
Messenger RNA biogenesis [BR:
zma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100272259
Chaperones and folding catalysts [BR:
zma03110
]
Heat shock proteins
HSP60 / Chaperonin
100272259
Mitochondrial biogenesis [BR:
zma03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100272259
Exosome [BR:
zma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100272259
Exosomal proteins of other body fluids (saliva and urine)
100272259
Exosomal proteins of breast cancer cells
100272259
Exosomal proteins of colorectal cancer cells
100272259
Exosomal proteins of bladder cancer cells
100272259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100272259
NCBI-ProteinID:
NP_001140224
UniProt:
C0HFM6
LinkDB
All DBs
Position
6:complement(173220520..173225978)
Genome browser
AA seq
580 aa
AA seq
DB search
MYRAAAVISRSSSALRRQLARGVAGELPRLLARGYAATAKEVSFGVGARAAMLQGVNDLA
DAVKVTMGPKGRTVIIEGSHKGPKVTKDGVTVAKSVEFEDSAKNVGANLVKQVADATNKA
AGDGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGINKAINAITAHLKSKAWKINSPEEI
NQVATISANGEKEIGDLISKAMEKVGKDGVITIVDGKTLDNELEAVQGMKLSRGYISPYF
VTDQKTQKCEMENPLILIHDKKISNMDSLLPALEISIKNRKPLLIVAEDVEGDALSMLVL
NKHRAGLKVCAVKAPGFGENRRHNLDDMAVMTGGEVISEERGLDLGKVQLQMLGTAKKVT
VSLDDTIILDGGGDKQQIDERCQQLRESIDTSTAVFDKEKAQERLSKLSGGVAVLKIGGA
SEAEVGEKKDRVTDALNAARAAVEEGIVPGGGVALLYATKELDKISTANEDEKIGVQIIK
NSLKAPLMTIAANAGIDGAIVIGKLIEQEDLSLGYDAAKGEYVDMIKAGIIDPVKVIRTA
LQDAASVSLLMATTEAAVSELPATKSRIASRMPQMSGMDF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggcggcggctgtcatctcgaggtcctcatcagcactgcggaggcagctcgcg
cggggcgtggccggggagctgccgcgtctgttggcgcgagggtatgcggccacggcgaag
gaggtgtccttcggcgttggcgcccgcgccgccatgctgcagggcgtcaacgacctcgcc
gacgccgtcaaggtcaccatgggccccaaggggcgcactgtgatcatcgaggggtcccat
aaaggtcccaaggtcacgaaggacggggtcactgttgcaaaaagcgtggagttcgaggat
agcgcgaagaatgttggggcgaatctggtgaagcaagttgctgatgctacgaacaaagct
gcaggggatggtaccacctgtgcaactgtgcttacacaggcaattcttactgaaggatgc
aaggccgtggcagccggtgtcaacgttatggacttgcggaatggtataaacaaggcaata
aatgctatcactgctcacctcaaaagtaaagcgtggaagattaattctccagaagaaatt
aaccaggtagcaaccatttctgcaaacggtgaaaaggaaattggagatctaatatcaaaa
gccatggaaaaagttggaaaggatggagtcattactattgttgatggcaaaacattggac
aatgagcttgaagcagtacagggaatgaagctgtccagaggatacatatctccttacttt
gtgactgatcaaaagactcagaaatgtgagatggagaaccctcttattcttatccatgac
aagaaaatctcaaacatggattctctccttccagcattagaaatttctatcaagaatcgc
aagcctcttctcattgttgctgaggatgttgaaggagatgctctgtcaatgcttgtactg
aacaagcatcgtgctggactcaaggtatgtgctgtcaaagctcctggatttggtgaaaat
agaaggcacaatctagatgacatggctgtgatgactggaggagaggttattagcgaggaa
cgcggtcttgatcttggcaaagttcaattacaaatgcttggcactgctaaaaaggtaact
gtatcccttgatgatactatcatcctagatggtggaggtgacaaacagcagatagatgag
aggtgccaacagcttagagaatcaattgacacaagcactgctgtattcgacaaagaaaag
gcccaagagcgtttatctaagttatctggaggtgttgctgtactcaagattggtggagct
agtgaagctgaagttggtgagaaaaaagatagggtgacagatgctctaaatgctgcaagg
gctgctgtggaggagggcattgtgccaggtggtggagttgcccttctttatgccaccaag
gagcttgacaagattagcacagcaaacgaggacgaaaagattggagttcaaattatcaag
aattctttgaaggctcccttgatgaccatagctgcaaatgctggcattgatggagctata
gtcatagggaagctgattgaacaagaggacctcagtttgggctatgatgcagcaaaaggg
gagtacgtagacatgatcaaggccggcatcatcgatcccgtgaaggtgatccgcaccgca
cttcaagacgctgcaagtgtttccctgctgatggcaaccacggaggccgctgtctccgag
ctcccggcaaccaagtccagaatagccagccgtatgccgcagatgagcgggatggacttc
tga
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