Zea mays (maize): 100272301
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Entry
100272301 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100272301 isoform 1
KO
K14318
nuclear pore complex protein Nup88
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100272301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100272301
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100272301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
100272301
NCBI-ProteinID:
NP_001346523
UniProt:
A0A1D6JDU8
LinkDB
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Position
10:143802875..143815401
Genome browser
AA seq
718 aa
AA seq
DB search
MHVGSIMELLLTPESDLGYMVTHISLNTDGSSLLLVGSHNLNIMYVHERISEDGDTIICR
TAPIASQILPSDSDGIKVLQASWHPFSNNHFAVLTSDAVFRLFDLSSDLEQPEQGFYLQP
IVPGKCQNASAICPVGFSYGSDHLWDRFSVFILFSDGSIFVLCPVVPFGSDYSKKHIQEI
YEDVNAFGLKSSNPNVVTNSHLAIAWLEATFPDLLHQSTDTSFLMSKAHAYAPLDDSLTL
QGPLCTVCEESNESESKSSSCEGKAVGFMYSSAGKDSVLVTAWGSGLLQVDALADEIQPR
WNIGVPSRLNVDSHGQINNVAMICDSNSQDPLALRSHRPSSTGSNVKSNIEAVWMGHSPP
LLRLAIVDLALPKTPNDNSLSLFADPLVPERFYCAHGGGLDMVTLHFLPFSYPEMSSTPP
SVHPVLTTGNSETSSPFLSGFVTIADAYGHVQLAGITCLGECFVVEMKGWKEPAPLQLDL
ESKIVKDVEPPATGMISKELIAGPDPPILPSSSSLKSLTPDSIEGKSTLHHYIKVFHEYY
VEYGHKVFIELKEHADYLKTEMEDKQKRLEAVKKSLISVEAKDGDINKRIDRAFKVYELL
EKRIDSFKMLPAANKKPLTQAEQEFKSQLDRFADVELDALRSSIAALSARMKRFAQQSTG
SAASTGMVPWQAQRAGRSHISESQMSLLKSSLEKLSLLNEENSLKLRLIDHELKNQER
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgggtagtatcatggaactgctgttgacgccagagtccgatcttggttatatg
gtcactcacatatcacttaacactgatggttcatcactgctgcttgttggatcacataac
ttaaatatcatgtatgtacatgagaggatatctgaagatggggatacaatcatatgcagg
actgcaccgattgcttctcagatcctacccagtgacagtgatggcataaaagttctccag
gcatcttggcatccctttagcaataaccattttgcagttttgacatcagatgctgttttc
aggttatttgatctttcatccgatttagaacagccagagcagggattttatttgcagcca
attgtacctgggaaatgtcaaaatgcttcagcgatttgtccagtgggtttctcttatggg
agcgatcatctatgggatagattttcggttttcatcttattcagtgatggttcaattttt
gtcctctgcccagttgttccatttggaagtgactatagcaagaagcatattcaggaaata
tatgaagatgttaatgcatttggattgaaatcttcaaatccaaatgttgtcactaattca
catttggccatagcttggttggaggcaacatttcctgacctgttacatcaatcaacagat
accagttttctgatgtcaaaagctcatgcatatgcgccattagatgattctctaacatta
caggggcctctttgtacagtttgtgaggaaagtaatgaatctgaaagcaagagcagcagt
tgtgaaggaaaagctgtaggttttatgtacagttctgctggcaaagattcagttcttgtg
actgcctggggtagtgggctgcttcaggttgatgctcttgcagatgaaattcaaccgcgg
tggaacattggggttccttcgcgtcttaatgtcgattcacatggacaaataaataatgtt
gccatgatatgtgactccaattcgcaagatccattggcgttgagatcgcatcgaccatct
agtacaggatcaaacgtgaagagcaacatagaagctgtttggatgggacactctcctcct
ttgctaaggctcgcaattgtggatttggcattaccaaaaactcctaatgataactctctg
tcattgtttgctgatccccttgttccagagagattttattgtgcgcatggtggggggctt
gacatggtcacactgcacttcctaccattttcataccctgaaatgtcttcgacaccaccc
tctgtgcatcctgtcctcactacagggaacagcgaaacaagctcaccttttctttctgga
tttgttaccatagctgatgcatatggtcatgtacagttagctggcatcacatgcttgggt
gagtgctttgtggtggagatgaagggttggaaggaaccggcacctcttcagcttgactta
gaaagcaaaatcgtcaaggatgtggagcctcctgcaactggaatgatcagcaaagaactt
attgctggtccagacccacccatacttccatcatcttcaagcctgaaatcgttgacccca
gactctattgaaggaaaatctacacttcaccactatattaaggtcttccatgagtactat
gtggagtacggacacaaggtgttcattgaactcaaggagcatgcggactatttgaagaca
gaaatggaagataaacagaaacgcttggaagcagtgaagaaatcacttatatccgtagaa
gccaaagatggagacatcaacaagaggatagatcgggccttcaaggtgtatgaactgttg
gagaagcgaatagatagcttcaagatgcttcctgctgcaaacaagaaaccattaacccag
gcagagcaggagttcaaatcacagcttgatcggttcgcagatgtggagctggatgctttg
cgttcctccattgccgccctgagtgctaggatgaaacgttttgctcagcaatccacgggc
agtgcggctagcacaggaatggtgccatggcaggcacaaagggctggacggagccatatc
tcagaatcccagatgtcacttctgaaatcttcgcttgagaagctctccctcctcaacgaa
gagaacagtctgaagctccggcttattgatcatgaactcaagaaccaggaacgatag
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