Zea mays (maize): 100273414
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Entry
100273414 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100273414
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zma
Zea mays (maize)
Pathway
zma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100273414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100273414
03036 Chromosome and associated proteins [BR:
zma03036
]
100273414
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100273414
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100273414
PBAF complex
100273414
GBAF(ncBAF) complex
100273414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100273414
NCBI-ProteinID:
NP_001141323
UniProt:
B4FVC8
LinkDB
All DBs
Position
4:complement(242372685..242377073)
Genome browser
AA seq
495 aa
AA seq
DB search
MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAI
TAAAGAEDPSYIITVPSYSAWFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRD
SLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEWGLINYGALPSGSKQAKEKRE
EAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFM
GHKEDRMRFENTDDNTDEPGANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQ
AAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLLKEAAANARAQLEKERNSIEQ
SLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacggcgacaacgatggcgccggtgacggcgccggtggccacagccaacctc
gaacctacaccaacacctctgcatccacgtcctgccgcgccacctcatctccgggcgctt
tccaccttggcccccgtcaagtcagaggctcctcccaccccctcgtcttctaccgccatc
accgccgcagccggagcggaggatccatcctacatcatcaccgtccctagttattcagcg
tggttctcgttcgactccatccacgacacggagcgccgcctcctgccggagttcttcgtg
ggggaggccgccgcggcgtcagggtgccggggcccgcacgcgtacaagtactaccgcgac
tccctgatacggaggttccgggcgcggccgggtcgacggctcacgctcacggaggctcgg
aggggccttgttggcgacgtcggctcagtccgccgcgtcttcgatttccttgaggaatgg
gggcttatcaactacggtgctttgccatcggggtcaaagcaagctaaagagaagagggaa
gaggctgcacaacagtcctcgttgccttttggggcaattgcacccaggaagctctgtacc
ggttgccgcaccgtgtgtgggcttgcttactacgcctgcgacaaggcagatataagtctt
tgtgctagatgctatgtaaataataactaccggccgggcctgtctcctgctaacttcaag
agagttgaaattactgaagatgcaaaaccagattggacagacaaagaaactcttcacttg
cttgaggctgtcttgcattatggggaagactggaaaaaggtgtctgaacatgttagtagt
cggtcagaaaaagattgtattgcaagatttataaggctaccttttggagaacagttcatg
ggacacaaggaggatagaatgaggtttgagaatactgatgacaatactgatgagcctgga
gcaaatgtctcaaaacgactacgtctcactccactagcagatgcaagcaatccgattatg
gctcaggttgcatttttatcagccattgtgggttccgatgttgcctcagctgcagcgcaa
gcagctatttctgcccaatcccgtgttgaccttaatgacggcgagattgaaacttcaata
aatagcattaagcaagaagaatcatctcacacaaatgggctctcagccaacgtgttactg
aaagaggcagctgctaatgcacgggcacaactcgagaaggaaaggaacagcatagagcaa
tctttatcaaacatagtagacgtccagatgaaggaaatccaagataaaatatgccggttt
gagcagaaggagatgctgatggagaaagagcggcagcagctccattttctaagggatcta
cttttcacagaccaattggcagtcatgcagcatcaacaaaggagtccagctgtagccaca
gagtgcaagggtgatgagaagccaaagcccgtggctagcatgagttga
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