Zea mays (maize): 100273912
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Entry
100273912 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100273912
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
zma
Zea mays (maize)
Pathway
zma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100273912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
100273912
Enzymes [BR:
zma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100273912
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100273912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_2
HHH_8
Motif
Other DBs
NCBI-GeneID:
100273912
NCBI-ProteinID:
NP_001141776
UniProt:
B4FY38
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All DBs
Position
5:complement(175699011..175702643)
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AA seq
419 aa
AA seq
DB search
MRLPLLPRSPPLAAAAAAAAMPPRRRRVVKATPLKPSSPQLSSTPPPTPSVEVPKTEPPD
HHDPTPSARRRLPLAAGAVEAQEEWHPLPLSTADLSLPLTLPTGQTFLWRRTSLSPLRFT
GAVGSHLVSLSHLPDSDDGRLAFLLHNDGGCPASSLPAARAALLDYLNAAVSLADLWRQF
AAADERFADVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWTLAGYGERLGE
VGGFVFHRFPTIERLARVSEQELREAGFGYRAKYIVGTAKELQAKPSGGQKWLASLREKE
LSDVIEALCTLPGVGPKVAACIALFSLDQNHAIPVDTHVWKVATQYLLPELAGKSLTPKL
SVVVADAFVTRFGSYAGWAQNVLFIGQLPTQKVVVAQVTSDNGTTKPTKRKRRVQPEPC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgcttcttccacggtctcctcccctcgccgccgccgccgccgccgccgcc
atgcctcctcgccgccgtcgcgttgtcaaagcgacgccgctcaagccgtcttctccacaa
ctctcctctaccccgccacctaccccgtctgtagaggtacccaaaaccgaaccccccgat
caccacgatcccactccctccgcccgtcgccgcctccccctcgctgccggggccgttgag
gcgcaggaagagtggcatccgctcccgctctccacggccgacctttccctcccgctcacc
ctccccaccggccagaccttcctttggcgccgcacctccctctccccgctccgcttcacc
ggtgccgtggggtcccacctcgtctccctctcccacctgcccgactccgacgatggccgc
ctcgcattcctcctccacaacgacggcggttgccccgcctcctcgttgcccgccgcccgc
gccgcgctcctcgactatctcaacgcggccgtctcgctcgccgacctctggcggcagttc
gccgccgcagatgagcgcttcgctgatgtctccgcgcggctcgggggcggcggcgcgcgg
gtgcttaggcaggaccccgtcgagtgcgtcttccagtttctatgctcctccaacaacaac
attgcccggatcgagaagatggtgtggacgctggcaggctacggggagcggctcggcgag
gttggtggcttcgtgttccaccggttccccacgatcgagcggctcgcgcgcgtgtcggag
caggaacttcgtgaggccgggtttgggtacagggcaaagtacattgttggcactgctaaa
gaattgcaggccaaacctagtggaggtcaaaaatggcttgcctcactgcgtgagaaggaa
ctttcagatgtgattgaagctctttgcactctcccaggtgttggtccaaaggtcgctgcc
tgcattgctctgttctcccttgatcaaaatcatgctattcctgtcgacacacatgtttgg
aaggttgctacacagtatctattaccagagctagctggcaagagcttgaccccaaaactt
agcgttgttgttgccgatgcttttgttactagatttggaagctatgctggttgggcacaa
aacgttctcttcattggccagctaccaactcaaaaagttgttgtggctcaagttaccagt
gacaatggtaccacaaagcctaccaaaaggaagcgcagggtgcaaccggaaccatgttga
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