Zea mays (maize): 100273997
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Entry
100273997 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100273997
KO
K10683
BRCA1-associated RING domain protein 1
Organism
zma
Zea mays (maize)
Pathway
zma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100273997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100273997
04121 Ubiquitin system [BR:
zma04121
]
100273997
03036 Chromosome and associated proteins [BR:
zma03036
]
100273997
03400 DNA repair and recombination proteins [BR:
zma03400
]
100273997
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100273997
Ubiquitin system [BR:
zma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100273997
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100273997
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100273997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
100273997
NCBI-ProteinID:
NP_001141855
UniProt:
B4FYI5
LinkDB
All DBs
Position
5:183840776..183849146
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AA seq
554 aa
AA seq
DB search
MSRKRAFSEEIGGATALKSLPTPIGLFEDECVFCHSFRTSQFHGPMVCYLKGRVVSIDEC
DSSDAIYVHRKCLEWASGIWFKGDIVMDFKPEITRASKLRCARCGLKGAALGCYYGPCLT
SFHVPCAVQTIGCRWDGDGYMLCPQHVSNALPCDKQGTDTKENYNASSLHQSQHTDKKGS
FDDHNRENEQADQLNISNASLLPQTRSDCHEAEFCTNFSRDGEQTDQLNSSPYIEREQVF
DSRRRRKNGQTDHLDISTPCVPHNQHSHPKEEISTDSSRDHHQQIDQLQTSRSSLPLGAC
QGEEMESDQPDASSCPADELVLLGLCLSVDEKDFVQKFACWTKATLAEEWAENVTHVIVG
KGAGSSWCRSFEVLMAILLGKWVVRFEWVADCLQLTPGPEASYEVLLLAASSIDSLGAND
GPKQSRIRATEGLQEPKLFSGLCFCLSDLMSPGNRGRTRGLIAAGGGRVLDKRDLRLLPK
KDPDPDGRRSPSPVNPRPYFVYDVEAPGGGRFSARLLRREIDEAREQAAAGAQVIGHLSV
FDAVAAYDAGILLV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaaaacgtgccttttccgaagaaattggaggcgctactgcattgaagagccta
ccaactccaatcggtttatttgaagatgaatgcgttttttgtcattcatttagaacgagc
cagtttcacgggccgatggtatgttacctgaagggaagagttgtgtccattgacgagtgc
gactcatcagatgccatctacgtccataggaaatgtctcgagtgggcttctggaatatgg
tttaagggtgacattgttatggactttaagccagaaattacacgtgcttcaaaactgaga
tgcgcaagatgtggactcaagggagcagcccttggttgttattacggtccttgcctcaca
agttttcacgttccatgtgcagttcagacaattggttgccgctgggatggtgatggttat
atgctgtgccctcagcatgtttcaaatgctctaccatgtgataagcagggcacagataca
aaggagaattacaatgcttcttctttgcatcaaagccaacatacagataagaaaggaagt
ttcgacgatcataatagggaaaatgaacaagctgatcagctcaacatctcaaacgcttcc
ttgctgcctcagactcggagcgattgtcacgaagcagaattttgtaccaatttctcaagg
gatggtgaacaaacggatcagcttaactctagtccatacatagaaagggaacaagttttt
gacagtcgtcgtcgaaggaaaaatggacaaacagatcatcttgacatttcgactccttgt
gtgccacacaaccaacattctcatccaaaagaagaaatatccaccgatagttcgagagat
catcaccagcaaatagatcagcttcagacttcaagatcatccttgccactgggggcctgc
caaggggaggagatggaatcagatcagcctgacgcatcaagctgccctgctgatgagtta
gttttgcttggtctgtgtttaagtgtggacgagaaggacttcgtgcaaaagtttgcgtgt
tggaccaaggcgacgctggcggaggagtgggccgagaatgtgacccatgtcattgtgggc
aaaggtgctggtagttcgtggtgcaggtcatttgaggtgcttatggcaatactgctcggg
aaatgggttgttcgtttcgaatgggtcgcggactgcttgcagctgactccaggtccagag
gcctcctatgaagtactactactagcagcatccagcatcgattcactcggcgcgaacgac
gggccgaagcagagcagaatccgggcaactgaagggttgcaggaaccgaaactgttttct
gggctgtgtttctgcctgagcgacctgatgagccctggcaacagaggccgcacgcggggc
ctcatagcggccggcggcgggcgggtgctggacaaacgcgacctgcgccttctgccgaag
aaggatccggatcctgacggccgccgctctccgtctccggtgaacccgaggccctacttc
gtgtacgacgtcgaagcgcccggaggtggtcggttcagcgcgaggctgctgcggcgggag
atcgacgaggcgagggagcaggcggcggccggggcgcaggtgatcggccacctcagcgtg
ttcgacgccgtcgcggcctatgacgcggggatcctgctcgtgtga
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