Zea mays (maize): 100274213
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Entry
100274213 CDS
T01088
Name
(RefSeq) DNA-directed RNA polymerase II subunit J
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100274213
09124 Replication and repair
03420 Nucleotide excision repair
100274213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100274213
03400 DNA repair and recombination proteins [BR:
zma03400
]
100274213
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100274213
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100274213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
PspAA
DUF7718
Motif
Other DBs
NCBI-GeneID:
100274213
NCBI-ProteinID:
NP_001142057
UniProt:
B4FJS1
A0A8J8Y8S4
LinkDB
All DBs
Position
5:188404626..188409210
Genome browser
AA seq
120 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTVEREDHTVGNILRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFEDEKNRYEDRMKQGF
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccctgaccgttatgagcgtttcgtcgtgccagagggcaccaagaaagtgtcc
tatgagagggatacaaagattgtgaatgctgcatcattcactgtcgaacgcgaggatcac
actgtaggcaatatcctccgcatgcagttgcacagagacccaaatgttctctttgccggg
tataagctccctcacccactccagtacaagatcattgttaggatccacacaacgagccag
tcctccccgacgcaggcctacacccaggctatcaatgatctagacaaagagcttgagtac
cttaagcaagcttttgaggatgagaagaacaggtacgaggacaggatgaagcaggggttc
tag
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