Zea mays (maize): 100274218
Help
Entry
100274218 CDS
T01088
Symbol
pco097024a
Name
(RefSeq) Cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
zma
Zea mays (maize)
Pathway
zma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100274218 (pco097024a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100274218 (pco097024a)
03009 Ribosome biogenesis [BR:
zma03009
]
100274218 (pco097024a)
04131 Membrane trafficking [BR:
zma04131
]
100274218 (pco097024a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zma04147
]
100274218 (pco097024a)
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100274218 (pco097024a)
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100274218 (pco097024a)
Membrane trafficking [BR:
zma04131
]
SNARE
SNARE associated proteins
Others
100274218 (pco097024a)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100274218 (pco097024a)
Exosome [BR:
zma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100274218 (pco097024a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
AAA_5
CDC48_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
Vps4_C
Viral_helicase1
IstB_IS21
ABC_tran
AAA_7
NACHT
NB-ARC
AAA_lid_PRS2_C
TsaE
DUF815
AAA_24
ResIII
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
100274218
NCBI-ProteinID:
NP_001347491
LinkDB
All DBs
Position
1:complement(242562814..242567976)
Genome browser
AA seq
810 aa
AA seq
DB search
MASQGEPSASASDPKEKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLF
RGDTVLLKGKKRKDTVCIVLADETCEEPKVRMNKVVRQNLRVRLGDVVSVHQCQDVKYGK
RVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSE
YCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLELISKDTHGYVGADLAA
LCTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPN
VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA
GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSR
LQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRM
KDNPEAMEEDEVDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFR
FSEQSATAGAAAADPFASAGAAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaaggggagccctcggcctctgcttccgatccgaaggagaagaaggactac
tcgacggcgatactagagaggaaaaagtcaccgaaccgccttgtcgtcgacgaggccacc
aacgacgataactccgtcgtcgcactgcaccctgacaccatggagaggctgcagctcttc
cgcggcgatactgtgctcctcaagggtaagaagaggaaagacactgtttgcattgtcctt
gcggatgaaacctgtgaggagccaaaggttcggatgaacaaggttgtccgccagaacctg
agggtgaggcttggtgatgtggtttctgtccaccagtgccaggatgtgaaatatgggaag
cgtgtgcacattcttccaattgatgatacagttgaaggcattacagggaacctgtttgat
gccttcttgaaaccatacttcctagaagcatacaggcccgtgaggaaaggagaccttttc
cttgtcaggggtggaatgagaagcgtggaattcaaagtgatagagactgacccttctgaa
tattgtatcgttgccccagatactgaaatattttgtgatggggagcctattaagagagag
gatgaggagcgtcttgatgaagttggttatgatgatgttggtggagttagaaagcaaatg
gcccaaatcagagagcttgttgagcttccactacgccatcctcagcttttcaaatctatt
ggtgtgaagccaccaaagggcatattgctgtatgggccacctggttctggaaagactctt
attgctcgtgctgttgctaatgagactggagcctttttctttctgatcaatggcccagag
attatgtcgaagttagcaggagagagtgagagcaatctcagaaaggcatttgaagaagca
gagaagaatgctccatctatcattttcattgatgaaattgattccattgcacccaagaga
gaaaagaccaatggagaagtagaacgtcgtattgtttcacagctactgactcttatggat
ggactcaaatctcgttcccatgttattgttatgggtgctacaaaccggccaaacagcatc
gatcctgctcttagaagatttggaaggtttgaccgggaaattgacattggagttcctgat
gaagttggccggcttgaggttctccgtattcacactaagaacatgaagctagctgaagat
gttaatttggaactcatttcaaaggatacccatggatacgttggtgctgatcttgctgct
ctttgtactgaggctgctcttcagtgcattcgtgagaagatggacatcatagatcttgag
gatgagacaatagatgcagagatattgaactcgatggctgttacaaatgaccatttcaag
actgcgcttggaacaagcaacccatctgctctccgtgaaactgttgttgaagtcccaaat
gtctcttgggaggatattggtgggctggagaatgtcaagagggagctccaggagactgtt
caatatcctgtggaacatccagagaagttcgagaagtttggcatgtctccatccaaagga
gttctgttttatggtcctcctggttgtggtaaaaccttgttggcgaaggcaattgccaac
gagtgccaggctaacttcatcagtgtcaagggtcctgaattgcttaccatgtggtttggt
gagagtgaagccaacgtccgcgaaatttttgataaggctcgccaatctgctccttgtgtc
ctcttctttgatgagcttgactcaattgcgactcagagaggaagtagtgtgggtgatgct
ggaggcgcggctgatagagtgcttaatcagctactgaccgagatggatggcatgaacgcc
aagaaaactgtgtttattattggtgctacaaacaggcctgacatcattgatcctgctctt
ctgaggccagggcgtcttgaccagctgatctacattccactgcctgatgagcagtctagg
ctccagatcttcaaggcctgcctaaggaagtcccctgtggcaaaggatgtggacctgaat
gctcttgctaagtacacacaagggttcagtggagcagatatcacagaaatttgccagcgt
gcgtgcaaatatgcaatcagagagaacattgagaaggacattgagagggaaaggcggatg
aaggacaaccctgaggcgatggaggaagatgaagtggacgagattgccgagatcaaagca
gctcacttcgaggagtctatgaagtatgctcggcgcagtgtcagtgatgctgatatccgc
aagtaccaggcgttcgcccagacgttgcagcagtcccgtgggttcggcagcgagttccgc
ttctcagagcagtcggcgacagctggtgctgctgcagccgatccgtttgcttcggctggt
gctgcggctgacgatgacgatctatacagctag
DBGET
integrated database retrieval system
