Zea mays (maize): 100274281
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Entry
100274281 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100274281
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100274281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100274281
03009 Ribosome biogenesis [BR:
zma03009
]
100274281
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100274281
Spliceosome [BR:
zma03041
]
Complex A
U1 snRNP components
U1 related factors
100274281
Complex B
100274281
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
Pre-60S particles
Helicases
100274281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100274281
NCBI-ProteinID:
NP_001142117
UniProt:
B4FWP6
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All DBs
Position
3:5515750..5521024
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AA seq
494 aa
AA seq
DB search
MSRYDGRAADAGSYRDRRSEGAFGGGSRAFSAPSKADASAAASELDGLPRFEKNFYVESP
AVAGMTEEEVEAYRRRREITVDGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ
GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQI
QQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVT
YLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVTIG
SEDLKANHAIVQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQTTRQLRMDG
WPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY
VHRIGRTGRAGAKGTAYTFFTAANARFAKELINILEEAGQKVSSELAAMGRGAPPPSSGY
RDRYRGYGGGRSWS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacggccgcgctgcggacgcgggctcctaccgcgaccgccgcagcgag
ggggcgttcggaggcgggtcgagggcgttctcggcgccgagcaaggcggacgcttccgcg
gcggcctcggagctagatgggctgccgcgcttcgagaagaacttctacgtggagtcaccc
gcggtggccggcatgacggaggaagaggtggaggcgtaccgccgccgccgggagatcacc
gtcgacggccgcgacgtgcccaagccggtgcgtgagttccgtgatgtgggcttcccagaa
tatgtgttgcaagagatcacaaaagctggttttgtggaacctacccctatccaatcgcaa
ggttggccgatggcattgagaggccgcgaccttattggcattgcagagacaggatcaggg
aaaactcttgcttaccttttacctgccattgttcatgtgaatgcgcagcctattctttcc
cctggcgatggtccaattgtcttggtgttagctcctacacgtgaacttgctgttcagata
cagcaagaagcaaccaagtttggtgcatcatcaaagataaaaagtacttgcatatatggt
ggtgtgccaaaaggtccacaagttcgtgatcttcaaaaaggtgttgaaattgttatagct
acaccaggacgactaattgatatgattgaatcacatcatacaaacttgcgaagggtcaca
tatcttgttttagatgaagcagaccggatgctagacatgggatttgaacctcagattaag
aaaattgtttctcagattcgtccagatcgccaaacactttactggagtgctacctggccg
aaggaagttgagcagctagcaaggaatttcctttttgacccatacaaggtcactattggt
tctgaagacttgaaggctaatcatgccattgttcagcatgtagagatattatctgagagt
cagaagtataacaagctggttaatctactggaggatataatggatggtagccgaatttta
atatttatggacaccaagaagggatgcgatcagactactagacagcttcgaatggatggt
tggcctgctttgtctatccatggtgacaagagccaagcagaacgggattgggtcctttct
gaatttaagtcagggaaaagtcctattatgacggccactgatgttgctgctcgaggccta
gatgtcaaggatgtgaagtatgtcattaactatgactttccggggtcactcgaggattat
gttcatcgtataggtcgaactggcagagcaggtgcaaaaggaacagcgtacacctttttc
actgcagctaatgccagatttgccaaggaacttattaatattctggaagaagctggacaa
aaggtcagctctgaattagctgctatgggtcgtggtgcacctcctccatcttcaggttac
cgtgatagatatagggggtatgggggtggccgatcgtggagttga
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