Zea mays (maize): 100274411
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Entry
100274411 CDS
T01088
Name
(RefSeq) Splicing factor CC1-like isoform 2
KO
K13091
RNA-binding protein 23/39
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100274411
Spliceosome [BR:
zma03041
]
Common components
Common spliceosomal components
General mRNP proteins
100274411
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_8
DUF3280
Motif
Other DBs
NCBI-GeneID:
100274411
NCBI-ProteinID:
NP_001142242
UniProt:
B4FBM8
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All DBs
Position
1:complement(243266684..243274614)
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AA seq
318 aa
AA seq
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MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITED
QLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVS
AVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAV
PATSVIGAPGAASLLPPTVAAVGSVPGAPVLPVTTQNVTMSTPTEFLLLKNMFDPALETD
PDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAAKAQNALHGRWFAGKM
ITATFMSALEYSTKFPNL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccaatggcaattgctctgtctggtcaaccgctgcttggacaagcagtgatg
gttaaaccatctgaggctgaaaagaacttagttcagtcaaatgcgacatcaggtggtgcg
gcttcaggtggagcaagaaagttgtatgttggcaatcttcactcaaatattactgaagac
caattgagacaggtatttgaaccatttgggcaagtagagcttgtacagcttcctgtagat
ccaatgactggattgtgcaaaggttatggttttattcagtttgcacggcttgaagatgca
aaagctgcacagagcttgaatgggcagcttgatatcgctggcagagttattaaggtttca
gctgttaccgatcatgtgggaatgcaagctagtggagcaactactggagatttagatgac
gatgaaggtggaggcttggcactaaatgcaagttccagagctgctctaatgctcaaattg
gacaggagtggtactgcgaccagcttaactcgtggtattggtgctgctggtgtggctgta
ccagctacttctgttattggggctccaggagctgcttctcttctaccaccaacagttgct
gctgttggatcagttcctggggcacctgtgcttcctgttaccactcagaatgtgaccatg
tctacacctacagaattcttgttgcttaaaaacatgtttgacccagcattggagacagat
cctgattttgacttggatattcgagatgatgtccaagatgagtgttccaagtttggtgca
gtgaagcatatttttgttgacaaaaatactgcaggctttgtgtatctgcagttcgatagc
gtgactgcagcagcaaaggcccaaaatgcccttcacggaagatggttcgctgggaagatg
attacagcgacatttatgtccgctctggagtacagtacgaagttcccaaacttgtga
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