Zea mays (maize): 100275187
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Entry
100275187 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100275187
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
zma
Zea mays (maize)
Pathway
zma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100275187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100275187
Membrane trafficking [BR:
zma04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
100275187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
DUF4837
zf-HC5HC2H
DUF2175
Motif
Other DBs
NCBI-GeneID:
100275187
NCBI-ProteinID:
NP_001337975
UniProt:
A0A1D6L259
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All DBs
Position
1:complement(275102900..275123551)
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AA seq
995 aa
AA seq
DB search
MVHSAYDAVELVADVPGHIEAVASHAGKLLVAVSDTEGFLWGSDCSLRIYSAPSPSDGGG
EIRWDGPYALERQEPRFWRRPPLAMEVSASRDLLISLSEWIALHRLPGLETVAVVSSKTK
GANVFAWDERRGFLAVGRQKRLTVFRLDSGREFVEVKEFGVPDILKSMAWCGDNICLGIR
REYMIINSMTGALTEVFSSGRIAPPLVVPLLTGELILGKDNIGVFVDQNGKLIQDGRIIW
SDTPASVVIHKPYAVARLPRHVEIRSLRPPNALVQTVVLRDVQKLVQTDHCILAALSNSV
HGLLPVPIGAQIVQLTASGEFEEALALCKLLPPEDSNLRAAKESSIHIRYGHFLFDNGSY
EEAMEQFSDSHVDITYVLSLYPSIVLPQTNIIGDHDKLLDMPELARESSDVTDEMESYSL
QLQEPDDKSPLEVKKMSHNALAALVKYLQKKRSGIIERATAEVTEEVVSGAVHHSLKLSE
PYKSKKLSKKRAQTHTSSIAREMATVLDTCLLQALILTGQSSGAIELLKGLNYCDLKICE
EFLKERREYMVLLELYKSNEMHRDALQLLNQLVEESKSEMENTYFNKKFNSQMILEYLRP
LCRSDPMLVLESSLYVLERNPSETIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSM
NDTGINPNLQNELVQLYLSEVLDWYKILKEEGNWTEKTYSPTRKKLISTLESNSGYNTDA
LLKRLPQDALFEERAILYGKINQHLRALSLYVHKLQMPERAVAYCDRVYEEREQQPSKSN
IYFNLLQIHLNPRKAEKEFEQKIIPVASQYSGIQKASATKPKGGRVGKKVVEIEGADDIR
FSPSGTDSGRSDGDGDDVNDRGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVS
FLEPLLRNSSEHRRNYLVIKNLILRANLQVKEDLYNRCQAVVKIDGDSTCSLCHKRVANS
AFAIYPNGQALVHFVCFKESQQIKAVRGANSVKRR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcgtacgatgctgtcgagctggtggctgacgtgccgggccacatcgag
gccgtcgcctcccacgctgggaagctcctcgtcgcggtttccgacaccgaaggcttcctc
tggggctccgactgctccttgcgcatctactccgctccttccccctccgacggcggcggc
gagatccggtgggacgggccctacgcgctcgagcggcaggagccgcggttctggcggcgc
ccgcccttagccatggaggtcagcgccagccgcgacctcctgatctcgctctccgagtgg
atcgcgctccaccgcctccccgggctcgagaccgtcgctgtcgtctctagcaagacaaag
ggggccaacgtctttgcttgggacgagcggcggggcttccttgccgtcggtcgacagaag
cgactcaccgtcttccgcctcgacagtgggcgagaatttgttgaagtgaaggaatttgga
gtgccagatattctgaaatcaatggcctggtgtggtgataacatatgtcttggaatcagg
cgggaatatatgataataaatagcatgaccggggcactaacagaagtgttttcttctggg
aggatcgctcctcctttagttgtgcctctccttactggggaactgatccttggcaaggat
aacattggggtattcgttgatcaaaatggtaaacttattcaagacggcagaattatttgg
tcagacacaccagcttctgttgttatacataaaccatatgccgtggcccgcctgccacga
catgtcgagatacgctctcttaggccccccaatgcattggttcagacagttgtgctccgt
gatgttcaaaagcttgtccaaactgaccactgtatacttgctgctctatctaactctgtt
catggtttgttgcctgttcctattggagctcagatagtgcaattgaccgcttctggagaa
tttgaggaggcgctagcattgtgtaagctacttccaccagaggattcaaatttacgggca
gcaaaggaaagctcaatacacataagatatggacactttttgttcgataacgggagttat
gaggaggcaatggaacagttttcagattcacatgtggacattacttacgtgttatctctg
tacccatctattgttctgcctcaaacaaatattataggtgatcatgacaagctgctggac
atgccagaattagcaagggaatcctccgatgtgacagatgagatggaatcatactcttta
cagcttcaagaaccagatgataaatctccattggaggtaaagaaaatgagtcacaatgct
ctagctgcccttgtgaagtatttgcagaagaaaagaagtggcataattgagagagcgacg
gctgaagtaacagaggaggtggtctctggagctgttcaccacagcttaaaattatctgag
ccatataagtcaaagaagctgagcaagaaacgagctcagacacatacaagctctattgct
agagaaatggcaactgtactggatacttgtctgcttcaagctcttattcttactgggcag
tcatcaggggcaatagagttgttgaaaggactcaattattgtgacctgaagatatgcgaa
gagtttttgaaggaaaggagagaatatatggttttacttgaactctataaaagcaatgaa
atgcaccgtgatgctctccaactactcaatcaattagttgaagaatcaaaatctgaaatg
gagaatacatattttaataaaaaatttaactctcaaatgatacttgaatatctcaggccc
ctttgtagatctgacccaatgctggttttagagtcttccttgtacgtccttgagcgcaac
ccatcagaaactattgagctctttttgtctgaaaatgttccagcagatttggtaaattca
tatctgaagcagcatgccccaaatttgcagtcaacttacttagagctaatgctctcaatg
aatgatactgggatcaaccctaatctgcaaaacgagctggtacaactgtacctttctgaa
gttctagactggtacaagattctgaaggaagagggaaactggacagagaagacatattcc
ccaacacggaagaagttaatatctacgttggagagcaattcaggttacaatacagacgca
cttcttaagcgccttccccaggacgctctttttgaggagcgagctatattgtatgggaaa
ataaatcaacacctcagagctctctctctctatgttcacaagcttcagatgccagagcga
gcagttgcatattgtgaccgtgtttatgaagaaagagaacaacaaccgtccaaatcaaat
atctattttaatcttctacagattcatctgaacccaagaaaagctgaaaaggaatttgag
cagaaaattattccagttgcatcacaatactctggaatccaaaaggctagtgctactaag
cccaaagggggtcgcgtaggtaaaaaggttgtagagattgagggggctgatgacatacgc
tttagccccagcggaacagatagtggccgaagtgatggtgatggagatgatgtaaatgac
cgaggccctataatgttaaatgaagcactggaactgttgagccaacggtgggacaggata
aatggtgctcaggctcttaggctgttaccaagagatactaaactccaggatcttgtatca
tttcttgagccactattgcgtaactctagtgaacatcggcgcaattatttggttatcaaa
aacttgattttgcgggcaaacttgcaggtcaaggaggatctgtataatcggtgtcaagct
gttgtgaagattgatggagatagtacgtgttctctttgccataagcgtgttgcaaatagt
gcttttgcaatatatccaaatggacaggctttggtgcattttgtctgctttaaagaatca
cagcaaattaaggccgtcagaggagcaaactctgtgaaacgtagataa
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