KEGG   Zea mays (maize): 100275606
Entry
100275606         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100275606
  KO
K10570  DNA excision repair protein ERCC-8
Organism
zma  Zea mays (maize)
Pathway
zma03420  Nucleotide excision repair
zma04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100275606
  09124 Replication and repair
   03420 Nucleotide excision repair
    100275606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zma04121]
    100275606
   03400 DNA repair and recombination proteins [BR:zma03400]
    100275606
Ubiquitin system [BR:zma04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100275606
DNA repair and recombination proteins [BR:zma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100275606
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EML Beta-prop_SPT8 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st WDR54 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Caldesmon
Other DBs
NCBI-GeneID: 100275606
NCBI-ProteinID: NP_001358644
UniProt: A0A1D6N6S7
LinkDB
Position
3:complement(182120254..182126054)
AA seq 445 aa
MWLEEVRRRERGELRARRFEAAARACRTASLALSNRKEFVTPHHGAVNSLQVDLTEGRYL
LSGASDGSAAVFDVWNATEYETGFIAKHRNILLVDKQHQNGHKFAISAAVWYPVDTGLFV
TASFDQFVKVWDTNSTQVVMEFKMPGKVYTAAMSPIATTHVLIATGSADVQVRLCDIASG
AFTHTLSGHRDGIMSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFRVLDQSRSQLGKRP
LVKSALYKDHTDSLGPSPSARRRTGISKKSSSALRKIQNPTHGHMQQRLHPGLSSSQNRA
TAHYGAVTGLRTTADGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTGKPLQLAVTE
DPSLVFVPCMASIKAYNLWSGKTFQTFRGHYELVSCCYYSEQDQELYTGSNDRQILVWSP
STPAFTKMEDDDKILSAADEDNWSD
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtggctggaagaggtgaggcggagggagcgtggagagcttcgcgctcggcggtttgag
gccgccgcccgagcgtgccgcacggcttcgctcgcgctctccaatcgcaaggagtttgtc
accccacatcacggcgccgtcaactcgctccaggttgatttgacagaggggaggtacctg
ctctccggggcatcggatgggtcggccgctgtgttcgatgtgtggaacgcgactgaatac
gaaaccgggttcatagcaaagcacaggaacatactgcttgtggacaagcaacaccagaat
ggccacaagttcgccatctcggcggccgtttggtatcctgtggatacggggctgtttgtc
acagcatcctttgaccagtttgtcaaagtttgggatacaaattcgactcaagtcgtcatg
gaatttaagatgcctggaaaagtgtacactgcagccatgtctccaatcgcaacaacgcac
gtgctcattgctactgggagtgcagatgttcaggtccgtctatgtgacattgcttctgga
gcctttacccacacgttgtctggtcatcgtgatggtatcatgtctttggagtggtctgcc
tcaagtgagtggattttgatgagtggtggctgtgacggggcaatacgtttttgggacatt
agaagagctggatgctttcgggttctggaccaatcaaggtctcaacttggaaaaaggccc
cttgttaaaagtgctctatataaggatcacacagattccttaggaccttcaccttccgca
aggagaaggacaggcatttctaagaagagttcatcagctttgcgcaaaattcaaaacccg
acacatggacacatgcaacagagattgcatcctggtttgtcatctagtcaaaaccgtgct
actgctcattatggtgctgttactggtttacgaacaactgcagatgggatgtaccttctt
agctcaggatctgattctcgcttaagactatgggacatcgattcaggctgcaatacgctg
gtcaattttgaagctatgcgattgcagacaggcaagccattacaattagctgtcactgag
gatccttcacttgtatttgttccatgtatggcaagcatcaaggcatacaatttatggtct
ggtaaaacatttcaaacattccgggggcactatgaacttgtgagttgctgctactatagt
gaacaggaccaagaactttatactggcagcaacgacaggcaaattcttgtgtggtctcca
tcaactccagcttttactaaaatggaagatgatgacaagatcctttctgcagctgatgag
gataactggagcgactga

DBGET integrated database retrieval system