Zea mays (maize): 100277195
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Entry
100277195 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100277195
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100277195
09124 Replication and repair
03420 Nucleotide excision repair
100277195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100277195
03400 DNA repair and recombination proteins [BR:
zma03400
]
100277195
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100277195
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100277195
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100277195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
100277195
NCBI-ProteinID:
NP_001339331
UniProt:
A0A1D6KX11
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All DBs
Position
1:complement(256712819..256721702)
Genome browser
AA seq
1227 aa
AA seq
DB search
MEDDEYEEGMEMGYGGHHQHGGGHAGYGAEEDDEVGYGGGGGEEMDEDADGDAEQQEDIT
QDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFA
ETLHRISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHDCE
EVTETAEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVLIA
QEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASGMFVRMLSRAGAKGGSSGQYIR
ATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVA
LDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCAL
SRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKA
KTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKP
RQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEISP
AVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYG
RCSRPLFIVEGQRLLIKKAHIRALQQRETPDEGWHELVSKGYIEYIDTEEEETTMISMTI
NDLQNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGI
YVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVI
MNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAP
PGTRVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHSESGMVDQVLLTTNADGLR
FVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMT
IGQLIECIMGKVAAQMGKEGDATPFTDVTVDNISKALHKCNYQMRGFETMYNGHTGRKLT
AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHG
AAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLL
FQELMAMAIAPRMLTHDMKTGKDQKKR
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacgagtacgaggaggggatggagatgggctacggcgggcatcaccagcac
ggcggcggccacgcggggtacggcgcggaggaggacgacgaggtggggtacggcggcggg
ggcggggaagagatggatgaggatgcggacggggacgctgagcagcaggaggatatcact
caggacgacgcctgggccgtcatatccgcctacttcgaggagaagggcctcgtgcgccag
cagctcgattccttcgacgagttcatccagaacaccatgcaggagattgttgatgagtcc
gccgacatcgagatccgccccgagtcgcagcacaaccctggccgccaggccgaatttgcc
gagactctgcacaggatcagctttggtcaaatctatctcagcaagccaatgatgactgaa
gccgatggagagacagctactttatttccaaaatcagcaaggctcaggaacttgacatac
tctgcaccactgtatgttgatgtgtcatacagagtaatgaagaaaggacatgactgtgag
gaagttacagagactgcagagtatccaaaagtgtttattgggaaggttccaatcatgttg
cgctctagttactgcacactgtatcaacaatctgagaaggatctcactgaacttggggag
tgtccttatgaccaaggtggttatttcattatcaatggaagcgaaaaggttcttattgcc
caggagaagatgagcactaaccatgtctatgtttttaagaagaggcagcctaataaattt
gcatatgtggctgaagtccgttccatggctgagaaccagaacagaccagccagtggcatg
tttgtacggatgctttcacgagcaggagcaaaagggggatcatctggtcaatatatccgt
gctactctaccttatattcgtgcggacattcccattatcattgtatttcgagcattagga
tttgttgctgacaaggatatactggagcatatatgttatgacttttctgatacacaaatg
atggaattgctacgcccatccctggaggaagcttttgtcattcaaaatcaacaggttgct
ctagactacattggaaaacgtggcgcaacagttggtgtcactcgagaaaagagaattaaa
tatgcaaaagaaatacttcaaaaggaaatgttgcctcatgttggtgttggggaattctgt
gaaactaagaaggcatactattttgggtatattattcaccgcctactgatgtgtgctctt
agtcgaagagctgaggatgaccgagatcattatggaaacaaaagactagatcttgctggt
ccactgcttggagggctgtttagaatgcttttcaggaagttaacaagggatgtgagatct
tacgtgcaaaagtgtgtagataatggaaaggaagttaatttgcaatttgctatcaaagca
aaaactgttaccagtggcttgaagtactcacttgctactggaaactggggacaggctaac
caagctggaaccagagcaggggtttctcaggtgcttaatcgcctgacctatgcttctacc
ctttcacatctccggaggctgaactctcccattgggcgtgaaggaaaattggcaaaaccc
cgccagttgcataattcacattggggaatgatgtgtcctgctgaaacaccagaaggacaa
gcttgtggcttggtgaaaaatcttgccttgatggtatatatcacggttggttctgctgca
aatccaattttggagtttttggaggagtggggcacagaaaattttgaggagatatcacca
gctgtcattccacaagctgctaaaatttttgtcaatggttgttgggttggaattcataga
aaccctgacctgttggttaagactcttaggcgtttaagaagacagattgatgtcaacact
gaagttggtgtggttcgtgatatccgtcttaaagaacttcgactttacacggattatgga
cgctgcagtcgtccattatttattgttgagggccagaggctgctcatcaagaaggcgcac
atccgagccttgcaacaaagggagactcctgatgaaggctggcatgaattggtctcaaaa
ggatatatagagtatatagatactgaagaagaggagactaccatgatctccatgaccata
aatgaccttcaaaatgcaaggcacaacccagaagaggcttactctgaaacttacacacat
tgtgagattcatccttcattgatacttggtgtttgtgcgtcgattattccgtttcctgac
cacaaccagtcacctcgtaacacatatcagtctgctatgggaaaacaagccatgggaatt
tatgtcaccaactaccagttaagaatggacacgttagcctacgttctatactacccacaa
aagcctctagttactactcgtgctatggaacatttgcacttcagacagttaccagctggc
attaatgcaattgttgctattgcttgttattctggatataatcaagaagattcagttatt
atgaatcaatcttccatagatcgtgggttcttccgatcactatttttccgctcttacaga
gatgaggaaaagaagatgggtacacttgtcaaagaggaatttggtcgtccaaatagggaa
aatactatgggaatgcgccatggttcatatgataaactagatgatgatggccttgcacca
cctggaacaagggtctcgggtgaagatgtcattattgggaagacatctcctattccacag
gatgacgctcaagggcaagcttctaggtactcgaagcgtgatcatagtacttctctgcgt
cacagtgaaagtggcatggtggatcaggttctgttgacaacaaatgcggatggtctaaga
tttgtcaaggttaggatgcgatctgttcgaataccacaaattggagacaagtttagcagt
aggcatggacaaaaaggaactgttgggatgacttacactcaagaggatatgccatggaca
atcgaaggcatcacacctgatattattgtgaatccacatgctattccatcccgtatgact
attgggcagctgattgagtgtatcatgggtaaagttgcggctcagatggggaaggaagga
gatgccactccattcacggatgtgactgtggataacattagcaaagctcttcataaatgt
aattatcaaatgcgtggatttgagaccatgtacaatggtcacaccggaagaaaactgaca
gcaatgattttcctgggacccacgtattaccaaagactcaagcacatggtggatgacaag
atacattccagaggacgtggtcctgttcagatactcacccgacaaccagcagaggggcga
tctcgtgatggtggtctccgctttggagaaatggaaagggattgtatgattgcacatgga
gcagctttcttcctgaaggaaaggctgtttgaccagagtgacgcatacagagtccatgta
tgtgagaaatgtggtctcatcgcaattgctaatctaaagaaaaactcgtttgaatgtagg
ggctgcaagaacaagactgacattgtccaagtacacataccctatgcttgtaagcttctg
ttccaggagcttatggcaatggccattgctcccagaatgcttacccatgatatgaagaca
gggaaggatcagaagaagcgctga
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integrated database retrieval system
