Zea mays (maize): 100277391
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Entry
100277391 CDS
T01088
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
zma
Zea mays (maize)
Pathway
zma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100277391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
100277391
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100277391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
100277391
NCBI-ProteinID:
XP_008677009
UniProt:
A0A1D6PWG8
LinkDB
All DBs
Position
4:37547073..37554393
Genome browser
AA seq
977 aa
AA seq
DB search
MFSMYAVIIRDRGHRCYNNLFDFADTFPPNICFLCIYYSRQRKPERNGSVFTPIAAMYSS
GHALPVANRSHGLVFGSLSKDWDDIRQRKDQLVNFLASLERASGDSAAAGKIEDSKLASP
VEPTEQKEKAAIIVLDSDDEDGNGSGNSKLASETNKELGTSGLINNIAERMTFNGSQAFG
TVHTYGDKNTQIVPYGQCSALVNQFPLQTSWQPSIQFERVVLQKRPEEQRMQDLVAASIA
EKRAETQVFLSLPTEKKRRRSDPSLHASDDTATVPKQRKSKGATVVAAANLSLVSQQTAT
SPEPDMVIEEEEKHKNESDGLDDYWKDFALAVESTKLDEVDEAAIEKEDNGKMEDIDCNH
DIRIHEDLGHVCRVCGMIVRRADSIIDYQWKKASRRRTNGYGGHSKDADEIDCGTVKLSE
DFIVADIAIHPRHARIMKPHQLEGFNFLVKNLIGDKPGGCILAHAPGTGKTFMLISFIQS
FMARYPSARPLVVLPKGILGIWKTEIKRWQVQDIPVYDFYSVKAEKRVEQLQILKSWEDK
MSILFLGYKQFSTIVTDDGGSNVTAACRDRLLKVPNLLILDEGHTPRNRETNVLESLNRV
ETPRKVVLSGTLFQNHVEEVFNILNLVRPKFLRMESSRPTARRIMSQVEIVGRSSKGLAD
GAFTKAVEETLLNDENFKRKAHVIRGLRELTKDVLHYYKGDILDELPGLVDFSVFLKLTP
KQKDIIYKLEAHDRFKRNAVGSALYIHPCLSELSEVNAEHRANTFRDDLVDSLVDSITVR
DGVKANFFMNILSLANSAGEKVLAFSQYISPMIFFERLLVKKKGWHVGKEIFMISGDTSQ
EDRELATDHFNNSADAKIMFGSIKACGEGISLVGASRVVILDVHLNPSVTRQAIGRAFRP
GQQKKVFVYRLVAADSDEVKVHETAFKKEVIPKLWFEWSEHCTTEDFKLGQIDIDDSGDE
LLDTKAIRKDIKALYRR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgttttctatgtacgcagtcatcatcagggatcgaggccatcgatgctacaataatttg
tttgattttgcagacaccttccccccgaatatatgttttctatgcatatattacagcagg
cagaggaaacctgagcgcaatggcagtgtatttacacctatagctgcaatgtattccagt
ggtcatgcactccctgttgcaaataggagccacggtttggtatttggcagtctgagcaag
gactgggacgacattcgccagcgcaaggatcagttggtcaacttccttgctagtcttgaa
cgagcctctggagattctgcggcagctggcaaaatcgaagatagcaaattggccagtcct
gtggagccaactgaacaaaaagagaaggctgccataatcgttcttgattcagacgatgag
gacggaaatggttcaggaaacagtaagttggcatctgagactaacaaagaactcggaaca
tctggattgattaataatatcgcagaaaggatgacgtttaatgggagccaagcatttgga
accgtgcatacttatggagataagaacacacagattgttccgtatggtcaatgttctgct
ttagtgaatcagtttcctttgcaaaccagttggcaaccatctattcagtttgagagagtc
gtgctgcagaaaaggcctgaggagcagcgaatgcaagatcttgtggctgctagcatagcc
gagaagagagcagaaacacaagtgttcctttcacttcccacagagaaaaagcgaaggaga
tcagaccccagtctgcatgccagtgacgatactgctactgtccctaaacaaagaaaaagt
aaaggtgccacagttgtagcagcagctaatttgtcattggtttcacaacaaactgctaca
tcaccagaacctgacatggttatagaggaagaggagaaacataaaaatgaaagtgatggt
cttgacgattattggaaagattttgcattggctgttgaaagcacaaagcttgacgaagtt
gatgaggcggcaattgaaaaggaagataatggaaagatggaggacatcgattgcaatcat
gacatccggattcatgaagatttgggtcatgtatgccgtgtgtgtggtatgattgtgaga
agagctgattcaataattgattatcagtggaaaaaggcttcaaggagaagaacgaatggc
tatggaggacattcaaaagatgctgatgagatagattgtggtactgttaaactgtctgaa
gatttcatagtcgcagatattgctattcatcctagacatgctcggataatgaaaccacat
cagttggaaggtttcaactttttggttaagaatttgattggagacaagcctggaggttgc
attctagctcatgccccaggtacagggaaaacatttatgcttataagcttcattcagagc
ttcatggcaaggtatccatctgcaaggcctcttgttgtgctgcccaaagggattctaggt
atatggaagacagaaattaaacgatggcaagtgcaggatataccagtgtacgatttttac
tctgtcaaggctgaaaaaagagtagaacagttgcaaatcctcaaatcttgggaagacaag
atgagtatactatttcttggatacaagcagttctccacaatcgtcactgatgatgggggc
agcaatgtcacagctgcatgtcgagacaggctgcttaaggttcccaaccttctgatactt
gacgaaggacatacacctagaaatcgggagactaatgtactcgaatcactaaatagagtg
gaaacaccacgcaaagtggttctttcgggtacacttttccagaatcatgttgaagaagtg
tttaatatcttgaatctcgttcgcccaaagtttctcaggatggaatcatcccgtcctact
gccagacgtataatgagtcaagttgaaatagttggtagaagttcgaaagggcttgctgat
ggcgcattcactaaggcagttgaagaaaccttattgaatgatgagaacttcaagagaaaa
gctcatgttattagaggtcttagagaactaacaaaggatgttcttcactattataagggt
gatatcttagatgaactacctggcttagtagacttcagtgtgtttttgaagctcacaccc
aaacagaaagacattatttataagttggaagcacatgatcggttcaaaagaaatgcagta
gggagtgcactgtacattcatccatgtctttcagaactttcagaggttaatgctgagcat
agggctaacacctttagagatgatttagttgatagtctggtagattctatcactgtgaga
gatggcgtgaaggccaattttttcatgaatatcctgtcacttgctaattctgcaggagag
aaagtgctagctttcagtcaatatatatctcccatgattttctttgaaaggctgctggtg
aagaagaaaggctggcatgtggggaaagagatctttatgatctctggtgatactagccaa
gaagacagagaattggcaacggaccattttaacaactctgctgacgcaaaaattatgttt
ggttctatcaaggcatgtggggagggtatctccctcgttggtgcgtcgagagttgtcatt
ctggacgtacacctgaacccatctgtcacccgtcaagcgattgggcgtgcattcaggccc
ggacagcagaagaaggtgtttgtgtacaggcttgtagctgccgattctgacgaggtaaag
gtccatgagacagcattcaagaaagaagtcataccgaagctgtggttcgaatggagcgag
cactgtactacggaagacttcaaacttggtcaaattgatattgatgactctggtgacgaa
ctgttggatactaaagcaatccgcaaggatatcaaagcgctgtatagaaggtag
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