Entry |
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Name |
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:zma00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100278146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:zma03019]
100278146
Messenger RNA biogenesis [BR:zma03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100278146
mRNA cycle factors
Common to processing body (P body) and stress granule
100278146
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:176197136..176204746
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AA seq |
1049 aa
MMTVPMDSASAAPSSTRDLAERLLTRNNELEDQLRKSAQSKVPSDPNIWLQMRDNFEKII
LIDHDLSEQRDVEYLLWQLHYKRIEDFRRNISAASSLASQSGKSNTNPDRVKRIKSAFKS
FLSEATGFYHDLMLKIKSNWGLPLNYFPDSLDNANNSVRDDMKTVQLKKGLISCHRCLIY
LGDLARYKSLNGDGDSASREYTAASSYYKEAASIYPSSGNPHHQLAILASYSGNEVVAVY
RYFRSLAADTPFATARDNLIILFEKNRQSYGQLPDNSKVPSTKTLPPRPSGWGRGRGEVR
FQPKDVNAETAERERECNNGDTLKTFYIRFVRLNGILFTRTSLETFGELFSSVSNDLQIL
LSSGLEEDLNFGSDAAENALAAVRLTVILIFTVHNVNKEPDRQSYAEIVQRRVLLQSAFT
AAFDFVGRILRRCSELHDIASSFYLPAILVYIEWLASHPELAVDSEMEEKHANARSFFWS
QCISFMNKLILTNLASVNDDDDEACFSNMSIYEEGETGNRFALWEDLELRGFLPLLPAHT
ILDFSSKHTFGSTKEKKARVQRIFAAGKSLLNFVQIDQLRIYFDSSSKKFVMAKNPPVSK
TNTPLHESPDALKTSGTEMDYEAARRFDSVSSNMGTLQSKVQFCPDGDDDEEIVFKPTAS
EKFPKAPSDLLVNGYTHPVPMSTAGWPTNASLVPVQSTGSMTATGWPPNGGSNAFPSTAS
LSAAGNYNINQSLPRSSVGWAVNGEQSVIPSIAPRFELVQPVEEPVSSWTSSGAQHVGTQ
HKHTGLTFPDVVSEPLVSASMVQRFSSTDYSKFLSEQEMLLVNGLNTVNLTGNGYLKQRL
QPGLSGLQSMGYSSQTPIEPGGTTANSMHNHLKITGENVPSTLDSVVPSIAPLGGMPMKF
TEAPLTASKKNPVSRPSKPVGPPPGFDHVAPKRQDDSIPVEKLQIPQVDDYSWLDGYQQS
IDHVHNLRTVYSGVSDSTAFATPFPFPGKQQLSGMHAQGATNEKTWQDFRLFEPSKQNML
QNYHQRNQQNGQIAEQEPANSVWSSSYHV |
NT seq |
3150 nt +upstreamnt +downstreamnt
atgatgactgttcccatggatagtgctagcgcagccccatcctccacgcgggaccttgcc
gagcgtctccttactaggaataatgaacttgaagaccagcttcgtaagtccgcacaatcc
aaagtcccatcagatcccaacatatggcttcagatgcgtgacaactttgagaagataatt
ctcatagatcacgacctctctgaacagagagatgtagagtatctcctatggcagttgcat
tacaaaagaattgaggacttcaggaggaacattagtgcagctagctcacttgcatctcag
agtgggaagagcaacactaacccagatcgagtcaagagaattaaatcagccttcaaaagc
ttcctttcagaagcaactggcttctatcatgacttgatgttaaagatcaaatcaaattgg
ggccttccactcaattactttccagacagccttgacaatgcaaacaactctgtgcgagat
gacatgaaaacagttcaattgaagaaaggtttgatttcatgccatcggtgtctgatatat
ttgggagatcttgctcgttacaagagtttgaatggtgatggtgattctgctagtcgtgaa
tacacagcggcttctagttactacaaggaggcagcttctatctatccttccagtggcaac
cctcatcatcagcttgctatactagcttcttactccggcaacgaggtggtggctgtttat
aggtacttccgaagcttagctgcagacactccttttgccactgcacgggacaacttgatt
attctttttgaaaagaatcgccaaagctatggacagctgccagacaacagcaaagttcct
agcactaagacattacccccacggccatctgggtggggccgaggacggggagaagtaagg
tttcaaccaaaagatgttaatgcagaaacagctgaaagggaacgcgagtgcaataatggt
gatacattgaagaccttctatataagattcgtcaggctcaatggaattcttttcacgagg
accagtttggaaacattcggggagctgttttcttcagttagcaatgatttgcagattctt
ctttcttctggtcttgaagaggaccttaatttcggttctgatgctgcagaaaatgcattg
gctgctgttagacttactgtcatccttatattcacagtgcacaatgtaaataaagagcct
gataggcagtcttatgctgaaattgtgcaacgcagagtactgctccaaagtgcgtttacg
gctgcttttgactttgttggacgaattctcagaaggtgttcagagctccatgatattgca
tcaagcttctatctgccagccattttggtctatattgaatggctggcgtcccatccagag
ttggctgttgattcagagatggaggaaaagcatgcaaatgccaggtctttcttctggagc
caatgcatctcatttatgaataagttgatccttaccaaccttgcatctgtgaatgatgat
gatgacgaggcttgcttttctaatatgagcatttatgaggagggtgaaactggcaacagg
tttgccctttgggaagatcttgaattgagaggttttctgcccttgcttcctgcacatacc
attttggatttctcaagcaaacacacatttggaagcaccaaggagaagaaagcacgggtt
cagcgaatttttgctgcaggaaagtcactgcttaactttgttcagattgatcagttgaga
atttattttgattcatcatcgaagaagtttgttatggccaagaaccctcctgtttctaaa
actaacacccctcttcacgaatctcctgatgcacttaaaacaagtggcactgaaatggat
tatgaggctgctagaagatttgattcagtttcttctaatatgggcacactgcagtctaaa
gtgcagttttgtcctgatggtgacgatgatgaagaaattgttttcaagccaacagcttcc
gaaaagtttccgaaagctccttcagatctgttggttaatggatacactcatcctgtacct
atgtctactgctggctggccaaccaatgctagtttagtgcctgttcagagcactggatca
atgactgcaactggttggccacccaatggtgggtcaaatgcttttccaagtactgcatct
ctatcagctgctggtaattacaacattaaccagtcgcttcccaggtcttccgttggttgg
gctgtcaatggtgagcaaagtgttattcctagcattgctccaagatttgaactcgtgcag
cctgttgaagagcctgtttccagctggacaagcagtggtgcacagcatgttggtactcag
cacaagcacacaggtttaactttcccagatgttgtgtctgaaccacttgtatctgcatca
atggttcaacgtttcagtagcactgattattcgaaatttctcagtgaacaagaaatgctc
ttagtgaatggactgaatactgtcaacttaactggaaatggctatttaaagcagagactg
cagcctggattgagtggtttacagtctatggggtattcatctcagacacctattgaacct
ggtggtaccactgcaaactcgatgcataatcatctgaaaattactggagagaatgtgccc
tctacacttgattcagttgtaccttcaatagctccattaggtggcatgccaatgaaattc
acagaagcgccactaactgcttcaaagaagaaccctgttagtcgtccatcaaagcctgtt
gggccacctccaggatttgatcatgtagccccaaagcgccaagatgattctattccagtt
gaaaaactgcagatcccacaggttgatgattacagctggctagatggttatcagcaatcg
attgatcatgttcacaacttaagaactgtttattctggtgtcagtgacagcactgcattt
gccactccattccccttccctgggaaacaacagttatctgggatgcatgcacaaggggct
acaaatgaaaagacatggcaagatttccgtctttttgagccttcaaaacagaacatgctc
caaaattaccaccaaagaaatcagcaaaatggtcaaatagctgaacaagagccagcaaat
tctgtctggtctagcagttaccatgtgtga |