Zea mays (maize): 100278704
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Entry
100278704 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100278704
KO
K23720
UV-stimulated scaffold protein A
Organism
zma
Zea mays (maize)
Pathway
zma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100278704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
100278704
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
100278704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
IMS_C
VHS
Motif
Other DBs
NCBI-GeneID:
100278704
NCBI-ProteinID:
NP_001145366
UniProt:
B6UCF8
LinkDB
All DBs
Position
9:complement(26394202..26396832)
Genome browser
AA seq
698 aa
AA seq
DB search
MPRPMASSSARDRAKDSDPSSSSAAADSSMASLIERATSTTAHGVDPVLLRAIKSSARAS
DAAIRDAFRLILSLMSKPHSHVRLLAFSIADELFMRSKLFRSLLADSLDGFLPLAVGFRR
ANPLPPPTTSAALLRKAAVQALERWHHLFGAHYRQLRLAVEYLKESARVQFSGLRATVDA
RAAREARMQEIYAGKVEQLRENLASIKAEIRSTIDEIRNGLEIIRAEHKKFEGYYVDDEE
EIASLSMRSIRTASLMAGEWVPETQENEAVFDALREAHRLLVSKHLVTVQEWITVLVRVN
LPDNRFRDSALKDFIDVKNEIRAVRDHCSELGLDLDNFHRRKGDQEEEDNEFWVEGNIEA
PNRARVQSSLDVASTSKDTEKGKWVVGGVCHIGKAPVAANGTRNLDPEKSKLLAEAPVLP
WSSVLDRWGSSGDVHVNQRGLEVESHWGRVDNDATIPAAKIAELNVHCSIYREAPVEILP
CHAPLKKGGLCQRRDLRVCPFHGPIVPRDAEGNPIEQNSGSSDAEVNPVEHLDIGGHSNE
LNGISDDDYMEGTSSRMTGVNNDYGDIAGTCDLGKITAEQLARQSVKNVRKREMDRKAQE
RAQRARIRQHNEDVLRNAALASTSYSAAAYEQPTEAHGRRGRRGKAKAPTLASMLKKKVT
TKDRIAERLLNTRATDATVRDVSHNEDMSYREAFPNQW
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcccgatggcctcctcctccgccagggaccgggcgaaggattccgacccctca
tcatcctcggcagcggcggattcctccatggcatctctaatcgagcgcgccacctccacc
acggcgcacggcgtcgacccggtgctcctccgcgccatcaaatcttcggcccgtgcctcc
gatgccgccatccgggacgcgttccgcctcatcctctccctcatgtccaagccccactct
cacgtgcggctcctcgccttcagcatcgccgacgagctcttcatgcgctccaagctcttc
cgctccctccttgctgactcgctcgacggcttcctcccgctcgccgtcgggttccgccga
gcaaaccccctcccgccgccgaccacgtccgctgccttactccggaaggccgccgtccag
gcgctcgagcgctggcaccatctctttggtgcgcactaccgccagctccgcctggccgtc
gagtacctcaaggagtccgcgcgcgtccagttctctggtctgcgggccaccgttgatgct
cgtgcagctcgtgaggctcgcatgcaggagatctatgctggcaaggttgagcagttgcgt
gaaaaccttgcgtcaatcaaggcggagattcggtccacgattgatgagattcgcaatgga
ttggagatcatccgtgctgaacataagaaatttgagggttattatgtggatgacgaggag
gagattgcatccttgtcaatgcggagcattagaacagcatcattgatggctggggagtgg
gtgcctgagactcaggagaatgaggcagtttttgatgcactgagggaagcacaccggttg
cttgtgtcaaagcatttggtcacagtacaggagtggataactgtgcttgtgagggtcaac
cttccagacaaccgtttccgagattctgcattgaaggatttcattgatgttaagaatgag
ataagggctgtgagagatcattgcagtgagcttggtcttgaccttgataattttcatagg
cggaagggtgaccaggaggaagaggacaatgagttctgggtggagggaaacatagaggca
ccaaatcgtgccagagtccagagcagtttagatgttgcgagcactagcaaggacactgag
aagggaaagtgggtggttggtggagtgtgtcacattggcaaggcaccagttgcagctaat
ggaacgagaaatcttgatccagaaaaatcaaaactcctcgctgaagcccctgtgctgcca
tggagctctgtcttggatcgctggggctcaagtggggatgtacacgtaaaccagagggga
cttgaggtcgagagtcattggggaagagtggataatgatgccactatacctgcagcaaag
attgcagagttgaatgttcattgctcaatttatagagaagccccagttgagatcctacca
tgccacgcccctctaaaaaaaggaggactttgccagagaagggatcttagggtatgtcct
ttccatggaccgattgtcccacgtgatgcagaaggaaatccaattgagcagaacagtggt
agttctgatgcagaagtaaatcctgttgagcacttagacattggaggacattcaaatgag
cttaatggaatcagtgatgatgattatatggagggaacctcttcaagaatgacaggtgtc
aataatgattatggtgacatagctggaacttgtgatctaggtaagattactgcagagcag
ttagcaagacaatcagttaaaaatgtccggaaaagagaaatggatcgcaaggcacaggaa
agggcccaacgtgcaagaatccgtcagcacaatgaagatgtcctgcgaaatgcggctctt
gcttcaacttcctattctgcagcagcctatgagcagcctacagaagcacatggtcggcga
ggacgccgaggtaaggcaaaggcaccaacgctggcatcgatgctgaaaaagaaagttacc
accaaagacagaattgcagagaggcttctgaacactcgagccacagatgccacagtaagg
gatgtttctcataatgaagatatgagctacagggaagcatttccaaatcagtggtag
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