Zea mays (maize): 100278989
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Entry
100278989 CDS
T01088
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100278989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100278989
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100278989
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100278989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
100278989
NCBI-ProteinID:
XP_020399518
UniProt:
A0A1D6P1Q5
LinkDB
All DBs
Position
9:77171647..77180837
Genome browser
AA seq
692 aa
AA seq
DB search
MASGSDPPKQYGITKPLSLLGPVEADLQRTAELEKFLVEAGLYESPDESARREEVLGKLG
QIVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADVDTLCVGPSYVNREED
FFIVLHEILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPAELDISQGS
VLYAVDEATVRSLNGCRVADRIIRLVPNIENFRTALRCLKCWAKRRGVYSNVTGFLGGVN
WALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDELGFPVWDPRKNPRD
KCHHMPIITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFF
EAYRNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQ
CAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINLYMFWKPGMELAVSHVRRKQIP
AYVFPEGYKRPRPSRHVNHQSDKNDTEDGTMISSPDSQLKRRHNSVGTDDIEPSWPAKRS
SVSPVHPKNSPQSGSSGDETRCNNQIKRAPSDATGGSPASPQALERSPDTIMSAPRCTTA
GAVCSGDAINKHDVPHVENCNTPTVAVCTTLKRVAEKVVSELVGSERMGNNNSAESLESM
EKAENVCFSGNGVSQGGLPEELEPNHRIEVVS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggctctgatcccccaaagcagtacggaataactaagccgttgtcgttgctc
gggcctgtggaggccgacctgcagaggacggcggaactagagaagtttttggtcgaggcg
ggtctgtatgagagccctgacgaatctgctaggcgggaggaggtgctggggaagcttggc
cagattgtaaaagactgggtgaagcaattgactagtcagagaggatatactgatcaaatg
gttgaagaggcaaatgctgtactcttcacctttggctcataccgacttggggttcatgga
cctggagctgatgttgatacactctgtgttggaccttcatatgtgaaccgtgaggaagat
ttttttattgtactgcatgagatattagcacaaacagaggatgtgaccgagctgcagcct
gtacctgatgcacatgtccctgttatgaaatttaagttccatggaatatctattgacctt
ctttatgccagtgtctccctcttagtagtaccagctgagttggatatctctcaaggatca
gtcctttatgctgtcgatgaagctactgtccgtagtcttaatggttgcagagtagcggac
cgaatcattagacttgttccaaatattgagaattttcgcacggcattaagatgtctgaag
tgctgggcaaaaagaagaggtgtttactctaatgttactggctttcttggtggtgtcaac
tgggctttactggttgcacgtgtctgccagctctatcccaatgctgtgccaagtatgctt
gtctcacggttttttagagtttttacacaatggcagtggccaaacccggttatgctttgt
tccatagaagaggatgaacttggcttccccgtttgggatccacgtaaaaatcctcgagat
aaatgtcatcacatgcctattataacccctgcatacccgtgcatgaactcgagctataat
gtttccacaagcacgctgagggtcatggtggaacagttccaatttggtaataaaatttgc
caggaaattgaaatgaataaggccagctggtctgctctgtttgagccttttcaatttttc
gaagcatacaggaattatctacaggttgacatcattgccgaggatgatgaggaccttaga
ctttggaaaggatgggttgaatctcgcttgcgacaactaactttgaagattgaacgtgat
acatatggaatgctgcagtgccatccttacccacatgagtatgcagacccttctaggcag
tgtgctcattgtgctttcttcatgggcttatcaagaaaagaaggtgtgaaaatacaggaa
ggacaacagtttgatattcgtggaacagtggatgagtttaggcatgaaatcaacttgtat
atgttttggaagcctgggatggagttagctgtttctcatgttcggaggaagcagatccca
gcttatgtgtttccagagggttataaaagacctcgcccttcaagacatgtgaaccatcag
tctgataaaaatgacacagaagatggcacaatgatcagttctccggacagtcagctgaag
aggaggcacaattctgttggaactgatgatattgaacccagctggcctgctaagaggtca
tcagtcagcccagttcatccgaaaaattcacctcaatctgggagctctggtgatgagact
agatgtaacaaccaaataaaaagggctcctagtgatgcgactggtggcagtccggcttca
cctcaggcattagagagaagcccagatactattatgtctgcccctaggtgtacgactgca
ggagcagtgtgttctggtgatgcaattaataagcatgatgttcctcatgttgagaactgc
aacactccaactgtagccgtgtgcacaactttgaagcgtgtagcggagaaagttgtatca
gagctagttggaagtgaaaggatggggaacaacaacagtgctgaatcgctggagagtatg
gaaaaggctgaaaatgtttgttttagtgggaatggagttagtcaaggtggccttccagaa
gagttagagccaaaccataggattgaagtggtttcttaa
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