Zea mays (maize): 100279122
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Entry
100279122 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279122
KO
K14311
nuclear pore complex protein Nup188
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100279122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100279122
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100279122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flo11
Acetyltransf_13
Motif
Other DBs
NCBI-GeneID:
100279122
NCBI-ProteinID:
NP_001337736
LinkDB
All DBs
Position
1:complement(123391694..123475518)
Genome browser
AA seq
1954 aa
AA seq
DB search
MASGRAATSSSILVNAAGTSKTLSASLWWDSFVVLSDDLDRATAGPSVPDALAKRIKSHH
AWLRGSVSMFGKPNDASRSALEVGEVAVGERRLTVKPELKEAALRASKCLNLDEVQSYIL
VKRSSEVSPTIRDADAEEFLHLVSVRYYLERQCLLKCIRRIFVHASDVSDSTDPIRDEAS
LLISEEIDRKLISIIEDSFSTASSVKAEAEFTISSLEETLIEVNLILDILFLTFYDNFSR
CNGRQWITLCSIFKDILCGSYGVGKFVASVEAKNSFHYAKAQLLLILIETLDFENLLRMI
HDEVPLSGGCSAFSVGDILEMDVEISKLPEFSLVESGPLILAWAVFLCLVLSLPESNTNL
EIDHTSYARRAFEFAPFNYLLGVLCSSIFRESDGPVSGYRGILRTFISAFIASYEVSYQK
EHSSFDMISSILCEVYDGEESLCMQFWDKDSFVDGPIRSVLHMLEEEYPFQISELIRFLS
AVCHGTWPANCVYNYLERMNGVTTIYTIPCVADGVGYGHQIESHHPVSIPSIEGITIPQG
THGYILKVLQEDTTLVRWEFPHSGVSFLLITLAQELHSCNYKKACDIIGLLYRMVSSNKD
LCFALMHVDKSLAVQTSNNLGQIEKHVRIDIAKVFCNSIFKYVRDVNNADILSKTFGLLA
EMMKCAPYHVFDAAFECNIFTSQLSSPSSDWLLSGALARMLFAAYEGNGDCSSLTSSVLD
FTTQVLRKGADADDIISPLIVFSIKYIMINHVNWKHKECSRWKTTLRVFELVKSCLQVKP
FSSKLGGIIWEILLYDSSVHGVLWSILSVLTRLLHDSYRSNYHGLKDIEDIQLVLCNGLD
IIYHILSNLPEDLLPNPPLVTMVLSSSLKPFSFITALISLMSFHSFGMQVAAARAFSALC
FIAYKAQPQLMENASFTSDVSEIRRLESNISCILDEDDKNNDCLVVAVFNLLTSAARYQP
AFLISLIEQSTKSTDHNASTNDRDNRVLVTSKSNARLVDQILDYIDRSIELMNRSPLVLL
SILDLLKALWESGIRFLFILEKLRSSVTFWDNLSRCIRATLDISPIDNIDAIDEKFSLRY
HCQGKIFEIMSHELFLQGKLLTETSNTVQDDPKGQKEHKSGPCRISVVLKWFDNAILADL
VSNLSSNAYKKELHHAKVAACLCIIHLITKLSTGDTGSLSFSFMKKIQIISTKLLQHHAF
LALLSQYSLHGYSGEQELNNLVLNDLYYLIRGELEGRQISSGPFQELLSFLLGFRIFEHN
PLEQLQNTYLMANDKFLFDVEHIHDELGVDLWTDSDKRSKEVAKKMLDIMSKANLMKYYA
DAKLSALMSFLKFLSVYKGAISNKNLDLPDGGISVAATQSAIKCACKSFESTVDSLLPQA
HTDEVLFPLLSGQVELLLTLARILFHQAKNKKSSHLCPDIVLLMKTSGASTCLFVDLMPS
AHALKQPVKTLLVLLLSSYEFMYSKVDIKDLPNDINIFGELALLSVSLLPILCKLAENRE
CSDLAVASMDLILKGSVPSNLWMPILQKHFHLQTILHKCQNGDLLSTQVILNFLLTLGRT
KDGAKVLQSANIFAFLKLLLSQLSLDDSCLRNSLSAQVKDVNLWGLGLGIVASLNHCLDD
DISHNNVVSNTISFLSGHVPLVSSYLSTQSATTHQSKKRALSQKSQTSLSALSLTENILI
LLCILAKYHFPRDTGKKEVDSELREIIIHLLAFISKGSVKTGNASKWNSSFFCPAVIKEE
VALNEKPPLICSKYGWFRFAASCTLSTAGVSVSPSAALSVVRRDKTSGDSDSIRQTRFTE
ILAVQIYRIAFLIMKFLCSQAKEAVKRAEELEFLDLAHFPELPMPDILHGLQDQVVCIVT
EIFEANGSSTLNPETEKVCQLLLVTLETSLYMELCVSQSCGIRPVLGRLEDFCKGIKAML
QAIEKHSSFEPFVRSLTEITSLLYPGLLHNNLLM
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcagggcggctacatccagttccatcctcgtcaacgccgccggcaccagc
aagaccctgtccgcatcgctatggtgggactccttcgtcgtcctctccgacgacctcgac
cgagccactgctggcccctctgtcccggatgccctcgctaagcggatcaaaagccaccac
gcgtggctccgagggtcggtctctatgttcgggaagccgaacgacgcgtccaggagcgca
ctggaagttggcgaggttgccgtcggggagcgtcgcctcactgtcaagccagagctcaag
gaggccgcgcttcgtgcaagcaaatgcctgaacctggatgaagtgcaatcatacattctg
gtcaagagatcttcagaagtctctccaacaatccgtgatgctgatgctgaggagtttctt
catctggtatctgtacgatattaccttgagcgtcagtgcttactgaagtgcatcagaaga
atctttgtgcatgcaagtgacgtgtctgattcaactgatcccattcgagatgaggcttca
ttattgattagtgaagagatagacagaaaactgatatctatcattgaagattctttttca
actgcatcttctgtaaaagcggaagcggaatttacaatttctagtctggaagaaactttg
attgaagttaacttgattcttgacatattgtttcttactttttatgataacttctcaaga
tgtaatggtagacagtggataactttgtgttcaatttttaaggacattctatgtggttct
tatggtgtcgggaaatttgttgcatctgttgaggcaaagaattcatttcattatgctaaa
gctcagctacttctcatccttattgaaactttggactttgagaatctcctccggatgatt
catgatgaagttcctctgagtggagggtgttctgcattttctgtcggtgatattctggag
atggatgttgaaatatcaaaattgcctgaattttcattggtagaatcaggaccacttata
ctggcttgggcagttttcctttgcctagttctgtctcttccagaaagtaacaccaacttg
gaaattgatcatacatcctatgcccgacgggcctttgagtttgcgccattcaattattta
ctaggagttctttgttcaagcatcttcagggagtcagatggtcctgtttctggttatcgg
ggtatattgcggacattcatttcagcattcatcgcttcatatgaggtatcttatcagaaa
gaacacagttcctttgacatgatttcgagtattttatgtgaagtttatgatggagaggaa
tctctctgtatgcaattttgggataaagatagctttgttgatggtcctatcagatctgtt
cttcatatgctggaggaggagtatccttttcagatatctgaactgatacgtttcttatca
gcagtttgccatgggacctggcctgctaattgtgtatataattatcttgagaggatgaat
ggagttacaacaatctataccatcccttgtgttgctgatggtgttggttatggccatcaa
attgaaagtcatcatccagtcagcattcctagtattgaaggcattacaattccacaagga
acccatggctacattttgaaagttcttcaagaggataccacattagttcgctgggagttc
ccgcattctggggtatcctttttgctcataactctggcgcaagagctccattcatgcaat
tacaagaaggcatgtgatatcataggtctactttatcggatggtgtcgtcaaataaggac
ctgtgcttcgctttgatgcatgttgacaagtcactggctgttcaaacatcaaataactta
ggacaaattgaaaagcatgtcaggattgatattgctaaggtattttgcaattccattttc
aaatatgtgcgagatgttaataatgctgacatattgtccaaaacctttggtctactagca
gaaatgatgaaatgcgctccatatcacgtgtttgatgcggcgttcgagtgcaacatcttc
acttcacaattaagtagtccatcaagtgattggttactttctggtgccctagctagaatg
ctttttgctgcctatgaaggaaatggagattgttcttcgcttacatcttcagtgcttgac
tttaccactcaggttcttcggaaaggagcagatgctgatgatataatatcacctttaatt
gttttctcaattaaatacatcatgattaatcatgtgaactggaaacacaaggaatgtagt
cgttggaagacaaccctacgggtgtttgaattggtgaaaagctgtcttcaagtaaaacca
ttctcatcaaagcttggtggcatcatttgggaaattctactatatgattcatctgtccac
ggtgtactctggagcatattatctgtactaacacgattactgcatgactcatataggagc
aattatcatggtcttaaggatattgaagatatccagcttgtcctttgcaatggacttgat
attatatatcacatcctgtccaatttaccagaggatttactgccaaatccaccattggtt
accatggttttgtcatcttcattgaagccgttttcttttatcactgctctaatatcattg
atgtcctttcatagttttggtatgcaagtagctgccgctagagcattctcagcattgtgt
ttcattgcatataaggcccaacctcagttgatggaaaatgccagctttacaagtgatgtt
tctgagatacggagattggaatcaaatatatcctgcattctagatgaggatgataaaaat
aatgattgtttggttgtggctgtattcaaccttttgacatctgctgctcgttatcagcct
gcttttcttatttccttgatagagcagagtacgaagtcaactgatcataatgcttccacc
aatgatcgtgacaatagagttttggttacttcaaaaagtaatgctagacttgttgaccaa
atcttggactatattgataggtccattgagctcatgaatagatctcccttggtgttactc
agtattctggacttgttgaaggcactatgggaaagtggtatacgatttttgtttatttta
gagaagctaagaagctctgtaacattctgggataacttatcacggtgtattcgtgctaca
cttgatatctcccctattgacaatattgatgccattgacgagaaattttcgttaaggtac
cattgtcagggtaaaatatttgagatcatgtcacacgagttatttttgcaaggaaaattg
cttacagagacttctaatactgtccaagatgatccaaaggggcaaaaagagcataaaagt
gggccttgtcgtatcagtgtagtcttgaaatggttcgataatgctattttggccgatctg
gtcagtaatttgtcaagtaatgcatacaaaaaggaacttcatcatgcaaaggtagctgcc
tgcctatgtatcatccatttaataacaaagttgtcaaccggtgatactgggagcttgtct
ttctcattcatgaagaaaattcagatcatatcaacaaaattgttgcagcaccatgcattt
ttagctctcctgtcacagtattccctgcatggatacagcggtgaacaagaacttaataat
ttggttctcaatgatctttattaccttatacgtggagaactcgaaggacgtcagattagc
tctggcccttttcaggagttgctcagttttcttcttgggtttagaatttttgaacacaat
cccttggagcaactacaaaacacatacctgatggcaaatgacaaatttttatttgatgtg
gagcacatacatgacgagcttggagttgatctctggactgattcagacaagaggtctaaa
gaagtagctaaaaaaatgctggatattatgagtaaagcaaatttaatgaagtattatgct
gatgcaaaactttctgcattgatgtccttcttgaaatttttatctgtctacaaaggagcg
atttctaacaaaaacttggacttacctgatggaggcatatcagtagcggccacacaatca
gcaattaaatgtgcatgtaaatcatttgagtcaactgttgattcactgctgcctcaagct
catacagatgaggttttgtttcccctcttgtccgggcaagtggaattattgcttactttg
gcccgaatattgtttcatcaagcaaagaacaagaaatcaagccatctctgtccagatatt
gtacttctaatgaaaacttcaggtgccagcacttgtttgtttgttgatctcatgccatct
gctcatgctcttaagcaaccagtgaagacacttcttgttctgcttttgtcgtcatatgag
ttcatgtacagcaaggttgacataaaagacctaccaaatgatattaacatttttggcgaa
ttagcccttttaagtgtgagcttgctacctatactgtgcaaattggcagagaatagggaa
tgctctgatcttgctgttgcatcaatggacctaatattgaagggatctgtaccttctaat
ttatggatgcctattctgcaaaagcattttcatctccagactatactgcataaatgccag
aatggtgatttattatctactcaagttatacttaatttcctcttgaccttggggcgaaca
aaggatggtgctaaagttcttcagtctgccaatatttttgcattcttaaagttacttttg
agtcagttgtctctggatgactcctgtttgagaaattccttgagcgcccaagtgaaggat
gtgaacctatggggcttgggtctcggtattgttgcgtccctgaaccattgtttggatgat
gacatttctcataacaatgtcgtgagcaacactatcagcttcctttcaggacatgtgcct
ttggtgtcatcatatctgtctacacagagtgctactactcatcagagcaagaaacgggca
ttgtcgcagaagtcacagacatcgctttcagcccttagtcttactgagaatattctcata
cttctatgcatcttggcaaaataccattttccacgggacactggaaagaaggaagtagat
tcagaactaagagagattattatccacctgctagcatttataagcaaaggaagtgtaaag
actggcaatgcctctaaatggaactcatcgtttttctgccctgctgttatcaaagaggaa
gtagcgcttaatgagaaaccaccactcatttgtagcaagtatgggtggttcagatttgca
gcaagttgtactttgtcaactgcaggtgtttcagtttctcccagtgcagctttatcagtg
gtgagacgggacaagacttcaggagattctgattctataaggcagactcgttttactgag
atattagctgttcagatatacaggattgcttttcttatcatgaagtttctctgtagtcaa
gcaaaagaagcagtaaaaagggcagaagaactggagtttcttgacctcgcccattttcct
gagcttcccatgccagatattcttcatggtttacaggatcaagtggtttgtattgtcact
gaaatattcgaggcaaatgggtcaagcactctaaatcccgagacagagaaggtatgccag
ctcctattggtgacacttgaaacgtcactttacatggaactatgtgtatcccaatcatgt
ggcatcaggccagtacttggtcggcttgaagatttctgcaaaggaattaaggctatgctt
caagctatagagaagcactccagttttgaaccttttgtcaggtcgctaactgaaattact
tctcttttgtatcccgggcttttgcataataaccttctcatgtga
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