Zea mays (maize): 100279196
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Entry
100279196 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279196
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zma
Zea mays (maize)
Pathway
zma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100279196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
100279196
03036 Chromosome and associated proteins [BR:
zma03036
]
100279196
Transcription machinery [BR:
zma03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100279196
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100279196
PBAF complex
100279196
GBAF(ncBAF) complex
100279196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
100279196
NCBI-ProteinID:
NP_001344777
UniProt:
A0A804MIY8
LinkDB
All DBs
Position
2:complement(116511299..116521346)
Genome browser
AA seq
909 aa
AA seq
DB search
MEPKPSPPPAAPSRRRGAATKRKEKAASAVPSGSPSPKRQARERGPVYQPSLPPPQPRSR
QPARKPQRKPARNKSPRRSVEPPRAQEEEEGPPPLPPPRPSLEKEIEAVLSRGAGVHVVP
TFAGWFSWKEIHPIEKQMLATFFDGKSERRTPEIYLGIRNLIMNKFHCNPEVHLESKDLC
ELSVGEMDARLVILEFLAYWGLVNFHPFPSVVQEHKLVESKSSAETAEGISQAEKLFQFE
TVHSYLVPVSKEAEAISPVQFTSLLPEPTLAEDAIGAAESSVEYHCNSCSVDCSRKRYHC
RTQVDFDFCSDCYNEEKFDEGMSKSDFILMESADVPGSGGSNWTDHETLLLLEALEIFKG
KEWHEIAEHVATKTKEQCMLHFLQMPISEPFLDGDDFNETPQKITKQDSAETGPSDVPDK
MDVDGNAEGKESTDEKAYKKADSSSAETRTKLADQNISAKEDTMKLGDDDLVASIVDEPN
KSSLVDPAHKKNSANADVSGEHPSNFITNILRSTFEAVDHFLGKEDMGSFAEAGNPVMAL
AAFLASLVERDDAVSSCCSSLRAISEMSPALQLATEHCFILPDPPSDLKDPASTFSPCAG
GESQEGADTTQNVNDTDKNNSEREDSDLALEKESATFTSQKQHLEELSDAKETFIGGPEA
EAKSNSTKDSDNPIAKVGSSVASDKMRDGCNANAIPCPATSNHTTEPSSVASQEASPAST
KDTAIPEQVERPSSEELLADVSLPQGKVEPKKTEPAPAASSSIQQHGCKQAGNGNTEPKS
KENAAADDDPITRLQRAAGTAISAAAVKAKFLVEQEEGYIRQLAALVIEKQFQKMETKMS
FLTEVGNLVLRSRDLTERMRKKLLLERSMIIASRMGAAAASRTIQHGAPVTTRLPVGHVH
ALNPQLRRP
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaaaccctcgccgccgccggccgccccttcgcgccgccgcggcgcagcgacc
aagcgcaaggagaaggccgcatctgcggtgccctccgggtccccgtcgccgaaacgccag
gcccgggagcgcgggcccgtctaccagccgtcccttccgccgcctcaaccgcgcagccgc
caacccgcacgcaagccgcagcgcaagcccgcacgcaataaatcgccgcggcgctccgtg
gagccgccgcgcgcgcaggaggaggaggagggcccgccgccactgccgccaccacggccg
tcgctggagaaggagatcgaggccgttctgtcccgcggcgctggcgtccacgttgtaccc
accttcgccggatggttttcatggaaggaaattcaccccatcgagaagcaaatgttggct
acattttttgatgggaaatcagagagacggacacccgagatatatttgggaatcagaaat
ttaatcatgaacaagtttcactgtaatcccgaagtgcatctggagtccaaagatttgtgt
gagttgtcagttggggagatggatgctcgtctagtaatcttggagttcttggcctactgg
ggtttagttaatttccaccctttcccatcagttgtacaggaacacaagctggttgagagt
aaaagtagtgctgagacagcagaaggaatttctcaggctgagaagttatttcagtttgaa
acagttcattcttacttggtacctgtttcaaaggaagctgaagcaatatctccagttcag
ttcactagcttgctccctgagcctaccctagctgaagatgcaataggtgcagctgagtct
tctgttgagtaccattgcaattcctgctcagttgattgttcaagaaagcgttatcattgt
aggactcaggtagactttgatttttgttcagattgctacaacgaagaaaaatttgatgaa
ggcatgtcaaaatctgatttcatccttatggaatctgcagatgttccagggtctggtggt
tctaactggactgaccatgagacattgcttcttttggaagcgttagaaattttcaaagga
aaagaatggcatgagattgctgagcatgttgctacaaaaacaaaagaacagtgcatgtta
cacttccttcaaatgccaatttctgaaccgtttcttgatggcgatgatttcaatgaaaca
ccccagaagatcacaaaacaggattcagcagaaactggtccttctgatgtacctgacaag
atggatgtagatggtaatgcggaaggaaaagagagcactgatgaaaaagcttacaagaaa
gcagattccagttccgcagaaacaagaacaaaattagctgaccaaaatatttctgctaaa
gaggatactatgaaattaggtgatgatgacctagttgcttccattgttgatgaaccaaat
aaatcttcattggtggatcctgcacataagaagaattctgctaatgctgatgtctctggg
gaacacccatccaactttattactaatatcctgagatccacttttgaagcagttgaccac
tttctgggtaaagaagacatgggttcgtttgctgaagcaggaaatcctgtgatggcactg
gctgcgtttcttgcttctcttgtggaacgtgatgatgctgtttcttcatgttgtagttcg
ttgagagctatatcagagatgtctcctgctctccaactggcaactgaacactgttttatt
cttccagatccaccaagtgacctcaaagatccggcttccactttcagcccttgcgcaggc
ggtgagagccaagaaggtgctgatactactcaaaatgtgaatgataccgataaaaacaac
agcgaaagggaagatagtgatttagctctggagaaggagagtgctacattcacctcacag
aagcagcacctggaagaattatctgacgcaaaggaaacatttattggaggtcctgaggca
gaggccaaatccaacagcacaaaggattctgacaatccaattgctaaggtggggagcagt
gtagcatctgacaagatgagagatgggtgcaatgctaatgccattccgtgtcctgctact
tcaaatcatacaactgaacccagctccgtagcttcccaggaagccagtccagcaagtaca
aaagacacagctatccctgaacaagttgaaagaccaagttctgaggaattactagctgat
gtttcacttccacaagggaaggtagagccgaagaagactgaacctgcacctgctgcctcg
tctagtatccaacagcatgggtgcaaacaagctggaaatggcaacactgaacctaaaagc
aaggaaaacgctgcggccgatgatgaccccataacaaggctacagcgagcggccggtact
gccatttcggcagctgcagtgaaggccaagttccttgtggagcaggaggagggttacatt
cggcagctagctgcacttgtgatcgaaaagcagtttcagaagatggaaacaaaaatgtcg
tttctcaccgaagttggaaacctggtgttacgatcgagagatttgacagagaggatgcgg
aagaagcttttgttggagcggagcatgataatcgcttctcgaatgggtgcagcagcggct
tccagaacaatccagcacggggctccggtgaccaccagactcccagtagggcatgtgcat
gccttgaatccgcagctgaggcgcccttga
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