Zea mays (maize): 100279262
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Entry
100279262 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279262
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100279262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100279262
03012 Translation factors [BR:
zma03012
]
100279262
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100279262
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100279262
Translation factors [BR:
zma03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100279262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
dsrm
AAA_22
nSTAND3
T2SSE
ATPase
AAA_19
ABC_tran
AAA_23
ATPase_2
AAA_16
NACHT
PhoH
Myosin_head
Motif
Other DBs
NCBI-GeneID:
100279262
NCBI-ProteinID:
NP_001347882
UniProt:
A0A1D6L4C8
LinkDB
All DBs
Position
1:complement(282903058..282909668)
Genome browser
AA seq
1150 aa
AA seq
DB search
MRRGLRRGLGILLVPLPHAPSRLPPISLAALLPRRFNGFSRHSFCSFPVGERAVEQFSDD
EYDHEYEDLRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRRDRRDYDQIANLAKRMGL
YSEMYGRVVVASKVPLPNYRPDLDDKRPQREVVIPLGLQRRVEGLVQEHLDRAFLPLNKC
GGNTKNGSDMTENANLDEQHDSLLDRSVMEKILQRKSIRMRNFQRSWQESPEGAKMLEFR
RSLPADKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCNIICTQP
RRISAMAVAERVSTERGENLGESVGYKVRLEGIKGKDTHLLFCTSGILLRRLLSDRNLNG
VTHVFVDEIHERGMNEDFLLIVLKELLSRRRDLRLILMSATLNAELFSSYFGGAPTIHIP
GFTHPVRAHFLEDILERSGYKLTSSNQLDDYGQDKVWKTQRQLLPRKRKNQITTLVEEAL
KNSSFEIYGSRTRDSLVNWNPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWDDISCLKD
QLKAHPLLGDPNRVFLLACHGSMATSEQRLIFEKPPPNVRKVVLATNMAEASITINDIVF
VVDCGKAKETTYDALNNTPCLLPSWISKASARQRRGRAGRVQPGECYHLYPRCVYDAFAD
YQLPELLRTPLNSLCLQIKSLQVGSIGEFLSAALQPPEPRAVENAVEFLKMIGALDGNEN
LTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSVRDPFLLPQEKKDLAGTAK
ARFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSSQTLQAIHSLRKQFSYILKD
SGLIDSDGNTNNSLSHNQSLVRGIICSGLFPGIASVVHRESSMSFKTMDDGQVLLYANSV
NAKYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGAVAKGGMAGHLKMLDGYID
FFMDPSLSECYLQLKEELDKLIQQKLEDPNFDIHKEGKYILFAVQELAAGDLCEGRFVFG
RETSRARLRSPEDDGKSNLIKDGMNPKSLLQTLLMRAGHTPPRYKTKHLKTNEFRAVVEF
KGMQFVGKPKRNKQLAERDAAIEALGWLTQTSGVKAPDENDDDSPLDLTDSMLKLLTRPR
RHSKNSSRKR
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcggcctgcgtcgcgggttgggcatcctcctcgtcccgctcccgcacgcaccc
agccgcctgccgccgatctctctcgcggctctcctcccccgacgcttcaatggcttctcc
cgccactccttctgcagcttccccgtcggggagcgcgccgtcgagcagttctcagacgac
gaatacgaccacgagtacgaggacctccggccgtcgtcatcggtggcgaacatcgacgag
tggaggtggaagctgagcatgctgcagcgcaacgcggaggaacaggagatcatctccagg
gaccggagggaccgccgggattatgaccagatagccaacctcgccaagaggatgggactc
tacagtgagatgtacggacgggtcgtggttgcgagcaaggtaccactgccgaactacagg
cctgatctggatgacaagcggccgcaaagagaggtggtaatcccgctgggtttgcagagg
agagttgaaggacttgtgcaggagcacctagaccgcgcattcttaccactgaataaatgt
ggtggcaacacaaaaaatggctctgacatgactgagaatgcgaacctggatgagcagcat
gattcccttcttgatcggtcagtcatggagaagatacttcagaggaagagcattcggatg
cggaattttcagagaagttggcaggaatcacccgaaggtgctaagatgctagaattccgg
agatcccttccagcagacaaagaaaaagaaaggcttctagcagccattgcacgcaatcag
gtcattgtaatttctggtgagacagggtgtggtaaaacaacacagctgcctcagtttgta
ttggaatcagaaattgagtctggtcgaggggctttttgtaacataatttgtacacagcca
cgaagaatatctgcaatggcagttgcagaaagggtatccacagagagaggagaaaatctt
ggtgaatcggttggctataaagtccgattggagggaattaaggggaaagatacacatttg
cttttctgcaccagtggcatcttactaagacgcttactgagtgaccgaaacttgaatggt
gtgactcatgtatttgttgatgagatacacgaaaggggcatgaatgaagatttcctgttg
attgtactaaaagagctgttatcacgtcgccgtgatttgaggctgatattgatgagcgct
actctaaacgcggaactcttctcaagttattttggaggagcgccaactatccatattcct
gggttcacacatccagtaagggcacattttttggaagacatattagagaggtcaggctac
aagttgacctcaagcaatcaacttgatgattacgggcaagataaagtctggaaaactcag
agacagctattgcctagaaaaaggaaaaatcaaattactacacttgtcgaggaagccctt
aaaaattcaagcttcgagatctatggctccaggacacgtgattctctagtgaattggaat
cctgattgcataggtttcaacctcatagaggctgttctgtgccacatatgtcgcaaagag
cgacctggtgctgttttagttttcatgactggatgggacgatattagttgcttgaaggat
caactgaaagcacatccattgttaggtgatccgaatagggtttttctgcttgcatgccat
ggttctatggctacttctgagcagaggctaatttttgagaagccacctcctaatgttcgg
aaggtagtccttgccacaaatatggcagaagcaagtattacaataaatgatatcgttttt
gttgttgattgtggtaaagcaaaggaaaccacatatgatgctctaaacaatactccatgc
ttactcccctcatggatttcgaaagcttctgcccgtcagaggaggggtagagctggccgt
gtgcaacctggagaatgctaccatctgtaccctagatgtgtgtatgatgcatttgcagac
tatcagcttccagagcttcttagaactcctttgaattcattatgtctgcagataaaaagt
ttgcaagttggaagcattggggagttcctatcagctgctctacagcctccagaaccacga
gctgtcgagaatgcagtggaattcttgaagatgattggagcattagatggaaatgagaac
cttactgatcttggacgatacctttccatgcttccagttgatccaaaattgggaaagatg
ctcataatgggtgcagtttttcgatgcatagatcctatacttactgtagttgctgggctt
agtgttcgggatcctttcctgttaccacaggaaaagaaggatttggcaggaacagcaaaa
gctagattctcagcaaaggattatagtgatcatatggcccttgttcgggcttatgaagga
tggaaggatgcagagagagaagggtctgcttatgaatactgctggagaaatttcctttct
tctcaaacactacaagccattcactctctccggaagcaattcagctatattttaaaggat
tccggtttgatagactctgatgggaatacaaacaacagtttgagccataatcaatcattg
gtccgcggtattatatgttctgggctttttcctgggatagcatctgttgtgcatcgagaa
agctccatgtcctttaagaccatggatgacgggcaagttcttctttatgctaattcagtg
aatgcaaaatatcagaccatcccatatccatggctggtctttggtgagaaggtgaaggtg
aatgctgtcttcatccgtgattcaaccggagtatcagactccatattgattttgtttggc
ggtgctgtagcaaaaggaggcatggccgggcacttgaagatgctcgatggctacattgat
ttcttcatggaccccagcctgtctgaatgctacctgcaacttaaagaagaactcgataaa
cttatacagcagaagcttgaagacccaaacttcgacatccacaaggaaggcaagtacatc
ctattcgccgtacaagagctcgccgccggcgacctgtgcgaagggaggttcgtgttcggc
cgcgagacgagccgggcccggctccggagccccgaggacgacggcaagagcaacctcata
aaggacgggatgaaccccaagagcctgctgcagacgctgctgatgcgggccggccacacc
ccgcccaggtacaagacgaagcacctcaagacgaacgagttcagggccgtggtggagttc
aaggggatgcagttcgtggggaagccgaagcggaacaagcagctcgcggagcgggacgcc
gccatcgaggcgctggggtggctgacgcagacctccggcgtgaaggctccggacgagaac
gacgacgactcgccgctggacctgactgacagcatgctcaagctcctcaccaggccgagg
cggcactcgaagaatagctctaggaaacggtga
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