Zea mays (maize): 100279266
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Entry
100279266 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279266
KO
K14571
ribosome biogenesis ATPase
Organism
zma
Zea mays (maize)
Pathway
zma03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100279266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zma03009
]
100279266
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100279266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_14
AAA_5
AAA_22
Rad17
AAA_33
TIP49
AAA_16
AAA_2
AAA_17
AAA_28
RNA_helicase
nSTAND3
Vps4_C
NPHP3_N
AAA_18
ABC_tran
IstB_IS21
Mg_chelatase
Viral_helicase1
NACHT
NB-ARC
NTPase_1
TsaE
Cytidylate_kin2
Bac_DnaA
AAA_3
SKI
Parvo_NS1
AAA_11
Nucleolin_bd
tRNA_lig_kinase
Motif
Other DBs
NCBI-GeneID:
100279266
NCBI-ProteinID:
NP_001347883
LinkDB
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Position
9:complement(28851002..28855404)
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AA seq
768 aa
AA seq
DB search
MAKRPRHAGNGPGRSQLVPFEWKLHRLILNGGLAGPGASAEDVADALRVHHPEFRRQKQG
PFVASVRRALTSIPIPSPSSSDSSDDGSSASRRRGHHDAHATTSSSTSVSDAAARPSPPA
PAYDVTKSMLRSQYAAQTPKRSQQLEIEVAAEKPRRLITADGGGGGDAKPEAAPASEGFG
RGDKGPRFADLGGMEAVIEELMMEVVVPMCHPEIPHRLGVRPVAGLLLHGPPGCGKTTLA
HAIANETGVPFYKISAPEVVSGVSGASEENIRGLFQKAYRTAPSIVFIDEIDAIASKREN
LQREMERRIVTQLMTCMDQFHQNIGSGSSNLEAESSEKKPGYVIVIGATNRPDAVDQALR
RPGRFDREISLGVPDENARKQILKMLTQHLRLEGEFDLFKIARATPGFVGADLKALVDKA
GNLAMKRIIDERRARCCIEQDGSSKHDWWRQPWDESEVDELHITMNDFEEAAKMVQPSLR
REGFSSVPGVTWDDVGGLDSLRKEFDRCIIRCIKHPEDYEVFGVNMQAGFLLFGPPGCGK
TLIAKAVAHEAGANFIHIKGPELLNKYVGESESEVRKIFTRARTNSPCILFFDEVDALTT
KRGKEGGWVVERLLNQLLIELDGADQRQGVYVIGATNRIDVIDDAVLRPGRFGKKHYVPL
PGADERVSILKAHARSKPISTDVDLDALGRRAECNNLTGADLASLVNEAAMAALEERLEF
RDKGTSSLSSSSLIEMPHFERALSKIKPSVSEQQIKNYEALSMRYSSN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgcccgcgccacgccggaaacggccccggacgatctcagctggtgcctttc
gagtggaagctccaccgcctcatactcaacggcggcttggccggtcccggcgcctccgcc
gaagacgtcgccgacgccctccgcgtccaccacccggagttccgccgccagaagcaaggc
cccttcgtcgcctccgtccgccgcgctctcacctccatccccatcccctccccatcctcc
tctgactcctccgacgacggctcctccgcctcccgccgccgcggccaccacgacgcccac
gccaccacctcctcctccacctccgtctctgacgccgctgcccgaccgtcgccaccagcc
cccgcctacgacgtcaccaagtccatgctccgctcccagtacgccgcgcagacgcccaag
cggagccagcagctggagatcgaggtcgcggcggagaaaccgcgccgcctcatcacggcc
gacggcggcggcggaggcgatgccaagccggaggccgccccggcttctgaagggttcggc
agaggggacaaggggcccaggttcgccgacctcggcgggatggaggcggtgatcgaggaa
ctcatgatggaggtggtcgtgcccatgtgccatccggagataccgcatcgccttggcgtt
aggcctgtcgcggggctgctgctgcacgggccgcccggctgcggaaagaccacccttgcc
catgccattgctaatgagactggcgtgccgttctataagatctccgcaccggaagtcgta
tctggggtgtctggagcatctgaggaaaacatcaggggcttgtttcagaaggcctatcgg
actgccccctcgattgtatttattgatgagatagatgcgattgcatccaagagggagaat
ctacaacgagagatggaacggcggatagttactcaattaatgacatgcatggatcaattc
caccagaatattggatcgggaagtagcaatttggaagctgaatcatctgaaaagaaacct
ggttatgttattgtcattggagccacaaataggcctgatgctgtggaccaagctctgcga
aggccaggcaggtttgaccgagagatatcacttggtgttccagatgagaatgcacggaaa
caaatactgaagatgcttactcagcatctccgacttgaaggcgaatttgacttgttcaag
atagctagggcaacaccagggtttgttggtgctgacttgaaagcattagtggataaagca
ggaaatctagcaatgaagagaataattgatgaaagaagggctcggtgttgcattgagcag
gacggtagtagcaagcatgactggtggagacaaccttgggatgaaagtgaggtggacgaa
ctacatattaccatgaatgactttgaggaagcagcaaaaatggttcagccatctttgaga
agagaagggttttcttctgtccctggtgtcacatgggatgatgttggaggtcttgattca
ttaagaaaagagttcgaccgctgcattatccgttgtatcaagcaccccgaagactatgag
gtatttggagtgaatatgcaagctggcttcctgctgtttggacctcctggttgcgggaaa
acactaatagcaaaagcagtggcacatgaggcaggggctaactttattcacatcaagggg
cctgagctattgaacaagtatgttggggagagtgaatcggaagttaggaaaatattcact
cgtgcacggactaactccccatgcatcctgttttttgatgaggttgatgctttgacaaca
aaaagagggaaagagggaggatgggttgttgaacgtctcttaaatcagttacttatagaa
cttgatggtgctgatcaaagacaaggtgtctatgtgataggagctacaaacaggattgat
gtgatagatgatgctgttttacgtcccggtagatttggaaagaaacattatgtaccttta
cctggtgcagacgagagagtttcaatattaaaggcacatgctcgtagcaagcccatctcg
actgatgttgatttggatgcacttggtcgtcgtgctgagtgcaacaatctcactggtgcc
gacctagcatcactggtcaatgaagcagccatggcagcactggaagagagactggaattc
cgtgacaaggggacatcctcactgagttcgtctagcttgattgagatgccgcacttcgaa
cgtgctctatcgaagatcaagccatcagtatctgaacagcaaatcaagaattatgaggcg
ttgtcaatgagatactcgtcaaactga
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