Zea mays (maize): 100279276
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Entry
100279276 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279276
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
zma
Zea mays (maize)
Pathway
zma04142
Lysosome biogenesis
zma04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100279276
04142 Lysosome biogenesis
100279276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zma04131
]
100279276
Membrane trafficking [BR:
zma04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100279276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
VPS35L_N
Motif
Other DBs
NCBI-GeneID:
100279276
NCBI-ProteinID:
NP_001145769
UniProt:
B7ZXA7
LinkDB
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Position
5:complement(4149526..4158025)
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AA seq
803 aa
AA seq
DB search
MAAASTSVRVLPDGGADDEERWLAEGIAGVQQNAFYMHRALDSNNLKDALKYSAQMLSEL
RTSRLSPHKYYELYMRAFDEMKKLEMFFREETRRGSCSVVDLYELVQHAGNVLPRLYLLC
TVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDV
ENINDAVEFVLQNFIEMNKLWVRMQHQGPAREKEKRGKERNELRDLVGKNLHVLGQIDGV
DLDMYKETVLPRILEQVVNCKDDLAQFYLMDCIIQVFPDEYHLQTLETLLSAFPQLQPSV
DIKTVLSQLMDRLSNYAASSPELLPEFLQVEAFAKFSNAIGKVIEAQPDMPVVGAITLYV
SLLTFTLRVHPDRLDYVDQVLGACVKKLSGKAKLEDSRATKQIVALLSAPLEKYSNIVTA
LELSNYPRVMDYLDNATTKVMAVVIIQSIMKNTTCISTSDKIEALFDLIKGLIKDMDGAQ
DDELDEEDFKEEQNSVARLIHMLHNDDPEEMLKILCTVQKHILQGGPKRLTFTVPSLVFS
SLKLVRRLQGQDGDVTGEDVPATPKKIFQILHQTIEALSCVPSPELALRLYLQCAEAAND
CDLEPVAYEFFTQAFILYEEEITDSKAQITAIHLIIGTLQRMNIFGVENRDTLTHKTTGY
SAKLLKKPDQCRAVYACSHLFWTDDQDGIMDGERVLLCLKRALRIANAAQQMASATRGSS
GSVTLFIEILNKYLYFFEKGIPQITNTVIQDLIELIRTEKQSDNSVADPSTEAFFSSTLR
YIEFQKQKGGTIGEKYEQIKTSS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcatcgacgtcggtacgggtgctccccgacggcggtgctgacgacgaggag
cgctggctcgccgagggcatcgccggcgtccagcaaaacgctttctacatgcaccgtgcc
ctcgattccaacaacctcaaggacgcactcaagtactcggcgcagatgctatcagagctg
cgcacctcgcgactatcgccgcacaagtactacgagctttacatgagggcgtttgatgag
atgaagaagctggagatgttcttcagggaggagactcgccgaggcagctgctctgtggtt
gatctgtacgagcttgtgcagcatgctgggaatgtcttaccgagactctatctcctgtgc
acggtggggtctgtgtacatcaaatcgaaagaggctcctgctaaagatgttcttaaagat
ctcgttgaaatgtgccgaggcattcaacatcctcttcgtggcctttttttgagaagttac
ctttctcaaataagcagagacaaattgcctgatattggttctgagtacgaaggcgatgtg
gaaaatattaacgatgcggttgaatttgttcttcagaatttcatagaaatgaacaaactc
tgggtccggatgcagcatcaggggcctgcccgagaaaaggaaaagcgtgggaaggaaaga
aatgaactgcgtgatctggtaggcaaaaaccttcatgttctaggccagattgacggcgtt
gaccttgatatgtacaaagaaactgttcttccaaggatattagagcaggtggttaattgt
aaggatgaccttgcacaattctacctgatggactgcataatccaagtctttccagacgaa
taccatttacaaacattggaaacgttattgagcgcatttccccagcttcagccaagtgtt
gatataaaaacagtactctctcaacttatggacagattgtctaactatgctgcctcaagt
cctgaactgttgccagagttcttgcaagttgaagcttttgctaagttcagtaatgctatt
ggaaaggtgatagaagcccaacctgacatgccagttgttggagccataactctatatgta
tcacttctgacctttactctccgtgtacatcctgatcggcttgattatgttgaccaagtg
ctgggtgcatgtgtcaagaaactttcaggcaaggcaaaacttgaagatagcagggcaaca
aagcaaattgttgcacttcttagtgctcccctggaaaaatatagcaatattgttactgca
ttagaactttcaaactatcctcgggttatggattatcttgataatgctacaaccaaagtg
atggctgtggtaataattcaaagcataatgaaaaacacaacctgcatatctacttctgac
aagattgaggcactattcgatttaattaaggggctgataaaggatatggatggagctcaa
gatgatgagcttgatgaagaagactttaaggaggaacaaaactctgtagcgcgtctcatt
cacatgctgcacaatgatgatcctgaagagatgctgaagatcttatgtactgtacagaag
catatacttcagggaggccccaagcgtctaactttcactgtgccttcgttagtattctct
tctcttaagctggtcaggcgattacaaggccaagatggagatgtcactggggaggatgtt
cctgcaactccaaagaaaatattccagatattgcatcagactattgaagcactttcttgt
gttccttctccagagttagctctgagactatatttgcagtgtgcagaggctgccaatgac
tgtgatttggaaccagttgcttatgagttctttactcaagcgttcattttatatgaagaa
gaaatcacggattcaaaggctcagatcactgcaattcacctgataattgggacccttcag
cggatgaatatatttggggtggaaaatagagacaccctcactcacaagacaacagggtac
tcagcaaaacttctcaagaagcctgatcaatgccgagcagtatatgcgtgttcacatctt
ttttggactgatgaccaagatggtataatggatggtgaaagggttctcctttgtttgaag
cgtgccttgagaatcgcaaatgctgctcaacagatggctagtgctacaagggggagcagt
ggatctgtaaccctatttattgaaattttgaacaagtacttgtacttctttgagaaagga
attccacaaatcacaaacactgtgattcaagatttgattgaattgattagaacggagaag
caaagtgataactctgtagctgatccatctacagaggcattcttttctagcactttgcgg
tacattgaatttcagaagcagaaaggtggaaccataggcgaaaaatatgaacaaataaag
acaagttcatga
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