Zea mays (maize): 100279312
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Entry
100279312 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279312 isoform 1
KO
K19025
AP-5 complex subunit zeta-1
Organism
zma
Zea mays (maize)
Pathway
zma04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100279312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
100279312
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
100279312
SSDB
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Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
SPG48
Motif
Other DBs
NCBI-GeneID:
100279312
NCBI-ProteinID:
NP_001348199
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Position
2:complement(8732672..8739455)
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AA seq
572 aa
AA seq
DB search
MASPDLAAGDGSYDFHLRSLSAASRDSAAASDPASDPNLLQSVRRVCEMCRTAKEAKDEM
VARAFPVMGKLFQRCAAAPTQAVASTGVLLLTILQFFLDFGEAVLHDADGSLKTFFRSCL
SREFADPIVAERTVEFLVTNKTKILSSFPNLIPQFYPLLLKLIASNGERLENKFSEVLPL
MMSAGSFLPLFLSLMDLPMLVVALEKVERSSGTLIGSSIATIQKSAAPEMLLALMDEAYT
GSAVEEPSGNSGSDDSGPLDLTDPMFLDLLKDENDGIAAKHWISPTISSTLQAAFNSPQS
DRLKQSLEMAPRFLTLYFATALRDVNDSLLCALIPVVMSRYAAMFPDKVFSFKVRERLSD
FILAAFQRSPNIIAVLKKPITDRLGEAHDNLAKTELALHLCWAIGEHGAGGVGHKDVARE
LFENLELLLYENLATSRLGLSQEPGSDSMGASSRKSSQARLLCFVVTAIAKLATCHSELL
PRARVSLGKVARSRTSDRRVWQRACDYLGLMNEPAICLSVLGPSTAQGNGPGIVNWSEGG
TKMVAHVPFYLLAQQKGPPSHNFSFADLLPTE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccggacctcgccgccggcgacggcagctacgactttcaccttcgctctctc
tccgcggcctcacgggactccgctgcggcctccgaccccgcctctgaccccaacctcctc
caatctgttaggagggtgtgcgagatgtgccgaacggcgaaggaagcgaaggacgagatg
gtggcgcgggcgttccccgtgatgggcaagctatttcagcgatgcgccgccgctcccacg
caggccgttgcctccaccggcgtgctgctcctcaccattttgcaattcttcttggatttt
ggggaggctgttttgcatgatgctgatggtagcttgaaaaccttcttccgctcttgctta
agtagggagtttgcagatcctattgttgcagagcgcacagttgaattccttgtaacaaac
aagacaaagatccttagctcctttcccaatttgattccacagttctatccattgttgtta
aagcttattgcatcaaacggtgagagactggagaataagttttcggaagtacttccatta
atgatgtcagcaggatcttttcttcccctcttcctatcccttatggatttgccaatgttg
gtggtggcactggaaaaggtggaaagaagttctggaactcttattggtagtagtatagct
acaatccagaagagcgctgctcctgagatgcttcttgcactgatggacgaggcatatact
ggttctgccgtagaagaacctagtggtaattcaggttctgatgatagtggtcccctagac
cttactgacccaatgttcttagaccttctaaaagatgagaatgatggcattgccgcaaaa
cattggatatcccctacgatatcttcaacgttacaagcagcatttaacagcccacagtcg
gacagattgaaacagtcactggaaatggcacctcgctttcttactttatattttgcaaca
gcattgcgagacgttaatgactcactgctgtgtgctcttattccagtagttatgtcaaga
tatgctgcaatgttcccagacaaagttttctctttcaaggtgagggaaaggctttcagac
ttcattttggctgcattccagcggtctcccaacatcattgcagtactgaagaaacctatt
actgacagacttggtgaggctcatgataatcttgccaagacagagttagcattgcacttg
tgctgggccattggtgagcatggagctggaggggtgggtcacaaggatgtagctcgtgaa
ctatttgaaaatttggagttattattgtatgaaaacctggcaactagccgtttgggatta
agccaagagccaggatctgattccatgggtgcatcatctagaaagtcatcccaagccagg
cttctctgctttgtggtgactgctattgcaaaattagcaacatgccacagtgagttgctt
ccgagggcacgcgtgtcattgggtaaggtcgctcgttcccgaacctcagacaggagggtc
tggcaacgggcctgtgactatttagggctcatgaatgaaccagccatctgtttatctgta
ctgggaccgtccaccgcccaaggaaatggtcctggtattgtgaattggagtgaaggagga
acaaagatggtagctcatgttcctttttaccttttagcccagcaaaaaggtccaccgtct
cataatttttcatttgccgacctcctcccaacagaatga
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