KEGG   Zea mays (maize): 100279342
Entry
100279342         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100279342
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
zma  Zea mays (maize)
Pathway
zma04120  Ubiquitin mediated proteolysis
zma04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100279342
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    100279342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zma04121]
    100279342
Enzymes [BR:zma01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100279342
Ubiquitin system [BR:zma04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100279342
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100279342
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_HPS5 EIF3I WD40_MABP1-WDR62_2nd zf-C3HC4_2 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EML zf-C3HC4 WD40_like Beta-prop_WDR75_1st zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N zf-RING_5 Beta-prop_SCAP zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 100279342
NCBI-ProteinID: NP_001145835
UniProt: B7ZXN2
LinkDB
Position
4:182643144..182650221
AA seq 655 aa
MGDSSVAGALVPSVPKPETAPSGDNSTAALALPEEAGTRAASASPQGPAEEEGPADRDLL
CPICMAVIKDAFLTACGHSFCYMCVVTHLSNKSDCPCCGHYLTKAQLYPNFLLDKVLKKI
SARQIAKTASPVDQFRCALQQGNEMGVKELDSLMTLIAEKKRQMEQQESETNMQILLVFL
HCLRKQKLEELNEIQSDLQYIKEDISAVERHRVELYRTKERYSMKLRMLLDEPTAQKMWP
SPMDKASCRFPPNSRTPLGGSCPGTLQNKKLDPKAQRRVQAQFNELQEYYLQRRRTGAQA
RRQEERETVAMNREGYHAGLQDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFD
RDDELFATAGVSKRIKVFEFSTVVNEPSDVHCPVVEMATRSKLSCLSWNKYSKNIIASSD
YEGIVTVWDVQTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVI
NIDMKANICSVKYNPGSSFYVAVGSADHHIHYFDLRNPSAPVHVFGGHKKAVSYVKFLSN
NELASASTDSTLRLWDVKDNLPVRTFRGHKNEKNFVGLSVNNEYIACGSETNEVFVYHKA
ISKPAASHRFVSSNLDDADDDPGSYFISAVCWKSDSPTMLAANSQGTIKVHVLAP
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgggcgactcctcggtggccggcgcgcttgtgccgtccgtgcccaagccggagaccgcg
ccgtccggtgacaactctacggcggcgctggcgctgccggaagaggcggggacgcgcgcg
gcgtcggcgtcgccgcagggacctgcggaggaagagggccccgccgatagggacctcctc
tgcccgatctgcatggccgtcatcaaggatgccttcctcaccgcctgcggccacagcttc
tgctacatgtgcgtcgtcacgcacctcagcaacaagagcgactgcccctgctgcgggcac
taccttaccaaggcccagctctacccaaactttctccttgacaaggttctgaagaaaata
tcagcccgacaaatcgcaaaaacagcgtcaccggtcgatcaatttcgatgtgcattgcaa
cagggaaatgaaatgggagttaaagagttagatagccttatgactttgattgctgagaag
aagcggcaaatggaacaacaagaatcggagacaaatatgcaaatattgttagtcttcttg
cactgccttagaaagcaaaagctggaagagttgaatgagatccaaagtgatctacagtac
atcaaagaggatataagtgctgtggagagacatagggtagaattataccgcacaaaagaa
aggtactccatgaagctgcgcatgcttttagatgagcctactgcacaaaaaatgtggccc
tctcctatggacaaagctagttgtcgctttcctcccaactctcggacaccacttggcgga
tcatgtccaggaactttacagaataagaagcttgatccgaaagctcaaagacgagttcaa
gcacagttcaatgagcttcaagaatactacctgcaaagacggcgtactggagcacaggca
cgcagacaagaagaaagagagaccgttgcaatgaatagagaaggctatcatgcaggtctt
caggatttccagtctgtgctaacaacattcactcgatatagtcgtctacgtgtcattgcg
gaactaagacatggagacttgtttcactctgccaatattgtgtccagtattgaatttgat
cgtgatgatgaactatttgctactgctggagtctcgaaacgtattaaagtcttcgaattt
tctactgttgttaatgaaccatcagatgtgcattgcccggttgttgaaatggctaccaga
tctaaacttagctgcctaagctggaacaagtactcaaaaaatattatcgcaagcagtgac
tatgagggtatagtaactgtgtgggatgtccagacccgccagagtgtgatggaatatgaa
gagcatgagaaaagagcatggagtgttgatttttctcgaacagagccttcaatgctagta
tctgggagtgacgattgcaaggtgaaagtgtggtgcacaaaacaagaagcaagcgtgatc
aatattgatatgaaagcaaatatttgttcggttaaatataatcctgggtcaagcttctat
gttgcagtcggatctgctgatcaccatattcattacttcgatttacgtaatccaagtgcg
cctgtccatgtttttggggggcacaagaaagcagtatcgtatgtcaaattcttatctaac
aatgagcttgcatctgcatcaacagatagcacgttacgtttatgggatgtcaaggataat
ttgccggtacggacattcagagggcacaaaaatgaaaagaacttcgttggattgtctgtg
aacaatgagtatattgcttgtggaagtgaaacaaatgaggtttttgtttatcacaaggct
atctcaaaaccagcagcaagccatagatttgtatcctctaacctggatgatgccgatgat
gatcctggttcttatttcattagtgctgtctgctggaagagtgatagccccaccatgtta
gctgctaacagtcagggaaccataaaagttcatgtacttgctccttga

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