Zea mays (maize): 100279564
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Entry
100279564 CDS
T01088
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100279564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100279564
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100279564
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
100279564
NCBI-ProteinID:
XP_008677105
UniProt:
A0A1D6QP50
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Position
4:complement(231389618..231394415)
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AA seq
862 aa
AA seq
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MDRERSSRRPRDDDVHHRSRERDDDRHRRRSRHDTDGHHRYEGGDEDRRRRHRHRDKDGS
GGGEDDRRHRNHHDNDDSRSHSYRDGGDDDRRRGKRRSVSPSESPPPSVKRDRSSSRPRE
SVERRDSTDREPRSSSRKRKDHEGGGDGDEPVREGGKRARASVDLPPSKEERPRRERRRF
EDVDENGKNGDMGKWGKEISSHELQKEELSINGGLQSYDAPNAGSQQPLSAVSVPSSVPI
PSKVSSISTNNANEGVSIRSDEVTVKSSTDGSAMSAASKSSNLSLDALAKAKKALQLKKE
LSEKLKKLPMLNNKLATAVTATQVSKEAAKTSVSAVDAQHFSKGEAKLTDVSSLPTSSIS
GTPAIGGVIGIPGLTHIPNLDSVKRAQELAAKMGFRQDPQFAPVINFFPGTSTEVTVAQR
PAKAPVLRLDSHGREIDEQGNVISMTKPTNLSTLKVNINKQKKEAFQIIKPDLDSLAKSS
VHFDERMGINQKKLLRPKRPGFQFVEEGKLSRQAELQKIKSQFGEAQAKELKVKQAQLAK
AKAEVDINPNFIEVAPGVRAPKQKQNEDIPEIEPWDAKILLSATYEDISVEEINMDKITI
YVEHPEPYDPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKV
KMSNLMKVLGSEAVQDPTRLEMEIRTAAAEREQAHVDRNIARKLTPSERREKKERKLFDD
PTNTIETIVCVYKIRDLSHPQTRFKVDVNAQENKLTGAVVITDSISVVVVEGGKKSIKRY
NKLMLNRIDWPAAVGGDEDTEMEADKPVNSCVLVWQGSVAKPTFHRFTVHNCRSEAAAKK
VFVDVSVPHYWDLAVNFSEDSS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgagcgctcctcacggcgccctcgcgacgacgatgtgcaccaccggtctcgc
gaacgggacgacgaccgacaccgccgccgcagtcgccacgacaccgacggtcaccacagg
tatgagggcggagacgaggatcgccgccgccgccaccgccaccgcgacaaggacggtagc
ggaggcggcgaggatgaccgccgtcaccgcaaccatcatgacaatgacgacagccgtagc
cacagctaccgcgacggcggtgacgacgatcgccgccgcgggaaacggcggtccgtttcc
ccgtccgagtccccgccaccttcggtgaagcgggatcgctcgtctagccgcccgcgggag
tccgttgagcgtcgcgactccaccgaccgcgagccgcggtcgtcgtcgcggaagcggaag
gaccacgagggcggtggcgacggggatgagcccgttcgcgaagggggcaagcgggccagg
gcctccgtggacctgcctccgtccaaggaggagaggcctagacgggagcgcaggaggttt
gaggatgtcgatgagaacgggaagaatggtgatatgggtaaatggggcaaggaaatctca
tctcatgagctgcagaaggaggagttatcaattaatggtggtttacagagctacgatgca
cctaatgctggttctcagcaaccactcagtgctgtttctgtgccatcttctgttcccatt
ccttcaaaggtatcttcaatttctaccaacaatgcaaatgagggagttagtattagatct
gatgaggttaccgtaaaatctagtacagatggaagtgcaatgtctgctgctagcaaaagt
agtaacctatctcttgatgctttagccaaagcaaaaaaagctttgcaactgaagaaggaa
ctgtcagaaaaactcaagaaattacctatgcttaataataaactcgctacagctgttact
gctacacaagtttctaaagaagcagcaaaaacttctgtatcagctgtagatgcacaacac
ttttctaaaggagaagcaaaacttactgatgtttctagtctgccaactagtagcatctcc
ggaacgccagccattggtggtgtgattggtattccaggtcttacacacatacccaatctc
gattctgtgaagagagcccaagagcttgctgctaagatggggttccgccaagatccacaa
tttgctcctgttatcaacttcttccctggtacatccactgaagttactgtggcacaaaga
cctgcaaaggctcctgttcttcgccttgattctcatggtagggaaattgatgagcaggga
aatgttatcagcatgacaaagccaacgaatctgagtactctgaaggtcaatataaacaag
cagaagaaagaagcttttcaaataatcaagccggacttggattctcttgcaaaatcaagt
gttcattttgatgaaaggatgggcataaaccaaaagaagctcctccgtcctaaaaggcca
ggatttcagtttgttgaagagggtaaactctctaggcaggctgaattgcaaaaaattaag
agtcaatttggtgaagcacaagctaaagagcttaaagtaaagcaagcccagcttgctaag
gcaaaggcagaagtagacattaatccaaactttattgaggttgctcctggtgtgagagct
ccaaaacaaaagcagaatgaagatatccctgaaattgagccatgggatgcaaaaatttta
ctttctgccacatatgaggatatctctgtggaggagattaatatggacaagatcaccata
tatgttgaacatccagaaccatatgatccacctgctgaacctgcaccaccaccgccccag
ccactgaagttgactaagaaggagcagaagaagttgagaacacaaaggcgtcttgctaag
gaaaaagataggcaagaaatgattaggcaaggcctcttggagccacccaagcccaaggtc
aaaatgagcaatcttatgaaagtactaggctctgaagctgtgcaagatcccacacggttg
gagatggaaataagaactgctgctgcagagcgtgagcaggctcacgttgaccgtaacatt
gcccgcaagctcacaccatctgagcgccgcgagaagaaagaacggaagctttttgatgat
cctactaacacaatagagactatagtttgtgtttacaagataagagacctgtcccatcca
caaacacgcttcaaagtcgatgtgaatgctcaagagaataaactaacaggtgctgtggtc
atcactgatagtatcagtgttgtggttgttgaaggggggaagaagtcaatcaaaagatat
aataagctcatgctaaaccgtatagactggcctgctgctgttggtggtgatgaagacaca
gaaatggaagctgacaagccagtgaatagctgtgtattggtctggcagggtagtgtggca
aaacccaccttccacaggttcactgtacataactgccggagtgaggctgcagctaagaag
gttttcgttgatgtttctgttcctcactactgggaccttgctgtcaatttctcagaagat
tcttcctga
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