KEGG   Zea mays (maize): 100279564
Entry
100279564         CDS       T01088                                 
Name
(RefSeq) protein RDM16
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100279564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zma03041]
    100279564
Spliceosome [BR:zma03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    100279564
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 100279564
NCBI-ProteinID: XP_008677105
UniProt: A0A1D6QP50
LinkDB
Position
4:complement(231389618..231394415)
AA seq 862 aa
MDRERSSRRPRDDDVHHRSRERDDDRHRRRSRHDTDGHHRYEGGDEDRRRRHRHRDKDGS
GGGEDDRRHRNHHDNDDSRSHSYRDGGDDDRRRGKRRSVSPSESPPPSVKRDRSSSRPRE
SVERRDSTDREPRSSSRKRKDHEGGGDGDEPVREGGKRARASVDLPPSKEERPRRERRRF
EDVDENGKNGDMGKWGKEISSHELQKEELSINGGLQSYDAPNAGSQQPLSAVSVPSSVPI
PSKVSSISTNNANEGVSIRSDEVTVKSSTDGSAMSAASKSSNLSLDALAKAKKALQLKKE
LSEKLKKLPMLNNKLATAVTATQVSKEAAKTSVSAVDAQHFSKGEAKLTDVSSLPTSSIS
GTPAIGGVIGIPGLTHIPNLDSVKRAQELAAKMGFRQDPQFAPVINFFPGTSTEVTVAQR
PAKAPVLRLDSHGREIDEQGNVISMTKPTNLSTLKVNINKQKKEAFQIIKPDLDSLAKSS
VHFDERMGINQKKLLRPKRPGFQFVEEGKLSRQAELQKIKSQFGEAQAKELKVKQAQLAK
AKAEVDINPNFIEVAPGVRAPKQKQNEDIPEIEPWDAKILLSATYEDISVEEINMDKITI
YVEHPEPYDPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKV
KMSNLMKVLGSEAVQDPTRLEMEIRTAAAEREQAHVDRNIARKLTPSERREKKERKLFDD
PTNTIETIVCVYKIRDLSHPQTRFKVDVNAQENKLTGAVVITDSISVVVVEGGKKSIKRY
NKLMLNRIDWPAAVGGDEDTEMEADKPVNSCVLVWQGSVAKPTFHRFTVHNCRSEAAAKK
VFVDVSVPHYWDLAVNFSEDSS
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggatcgcgagcgctcctcacggcgccctcgcgacgacgatgtgcaccaccggtctcgc
gaacgggacgacgaccgacaccgccgccgcagtcgccacgacaccgacggtcaccacagg
tatgagggcggagacgaggatcgccgccgccgccaccgccaccgcgacaaggacggtagc
ggaggcggcgaggatgaccgccgtcaccgcaaccatcatgacaatgacgacagccgtagc
cacagctaccgcgacggcggtgacgacgatcgccgccgcgggaaacggcggtccgtttcc
ccgtccgagtccccgccaccttcggtgaagcgggatcgctcgtctagccgcccgcgggag
tccgttgagcgtcgcgactccaccgaccgcgagccgcggtcgtcgtcgcggaagcggaag
gaccacgagggcggtggcgacggggatgagcccgttcgcgaagggggcaagcgggccagg
gcctccgtggacctgcctccgtccaaggaggagaggcctagacgggagcgcaggaggttt
gaggatgtcgatgagaacgggaagaatggtgatatgggtaaatggggcaaggaaatctca
tctcatgagctgcagaaggaggagttatcaattaatggtggtttacagagctacgatgca
cctaatgctggttctcagcaaccactcagtgctgtttctgtgccatcttctgttcccatt
ccttcaaaggtatcttcaatttctaccaacaatgcaaatgagggagttagtattagatct
gatgaggttaccgtaaaatctagtacagatggaagtgcaatgtctgctgctagcaaaagt
agtaacctatctcttgatgctttagccaaagcaaaaaaagctttgcaactgaagaaggaa
ctgtcagaaaaactcaagaaattacctatgcttaataataaactcgctacagctgttact
gctacacaagtttctaaagaagcagcaaaaacttctgtatcagctgtagatgcacaacac
ttttctaaaggagaagcaaaacttactgatgtttctagtctgccaactagtagcatctcc
ggaacgccagccattggtggtgtgattggtattccaggtcttacacacatacccaatctc
gattctgtgaagagagcccaagagcttgctgctaagatggggttccgccaagatccacaa
tttgctcctgttatcaacttcttccctggtacatccactgaagttactgtggcacaaaga
cctgcaaaggctcctgttcttcgccttgattctcatggtagggaaattgatgagcaggga
aatgttatcagcatgacaaagccaacgaatctgagtactctgaaggtcaatataaacaag
cagaagaaagaagcttttcaaataatcaagccggacttggattctcttgcaaaatcaagt
gttcattttgatgaaaggatgggcataaaccaaaagaagctcctccgtcctaaaaggcca
ggatttcagtttgttgaagagggtaaactctctaggcaggctgaattgcaaaaaattaag
agtcaatttggtgaagcacaagctaaagagcttaaagtaaagcaagcccagcttgctaag
gcaaaggcagaagtagacattaatccaaactttattgaggttgctcctggtgtgagagct
ccaaaacaaaagcagaatgaagatatccctgaaattgagccatgggatgcaaaaatttta
ctttctgccacatatgaggatatctctgtggaggagattaatatggacaagatcaccata
tatgttgaacatccagaaccatatgatccacctgctgaacctgcaccaccaccgccccag
ccactgaagttgactaagaaggagcagaagaagttgagaacacaaaggcgtcttgctaag
gaaaaagataggcaagaaatgattaggcaaggcctcttggagccacccaagcccaaggtc
aaaatgagcaatcttatgaaagtactaggctctgaagctgtgcaagatcccacacggttg
gagatggaaataagaactgctgctgcagagcgtgagcaggctcacgttgaccgtaacatt
gcccgcaagctcacaccatctgagcgccgcgagaagaaagaacggaagctttttgatgat
cctactaacacaatagagactatagtttgtgtttacaagataagagacctgtcccatcca
caaacacgcttcaaagtcgatgtgaatgctcaagagaataaactaacaggtgctgtggtc
atcactgatagtatcagtgttgtggttgttgaaggggggaagaagtcaatcaaaagatat
aataagctcatgctaaaccgtatagactggcctgctgctgttggtggtgatgaagacaca
gaaatggaagctgacaagccagtgaatagctgtgtattggtctggcagggtagtgtggca
aaacccaccttccacaggttcactgtacataactgccggagtgaggctgcagctaagaag
gttttcgttgatgtttctgttcctcactactgggaccttgctgtcaatttctcagaagat
tcttcctga

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