Zea mays (maize): 100279862
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Entry
100279862 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100279862
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100279862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100279862
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100279862
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
PRP4
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
WD40_like
Motif
Other DBs
NCBI-GeneID:
100279862
NCBI-ProteinID:
NP_001146287
UniProt:
B8A0D2
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Position
1:60926703..60930925
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AA seq
525 aa
AA seq
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MENPRPQAPALTPPMAPLPVPIHPPIAPIPVPPPRVPAPAPAAAASMASTPTPSTGDGGE
AEYEVSDDHRAARERHERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREM
ERRDRLRALMVRLEADGQVDRLLRAQEDDQAARIGEEEEEEQIEYPFFTEGSQELLKARL
DIARYSLPRAKARIERAKRRHEDPDEDPEAEAELVVKQAGEFVLECSEIGDDRPLTGCSF
SRDASMLATSSWSGIVKVWSMPQITKVATLKGHTERATDVVFSPADDCLATASADRTAKL
WKPDGSLLMSFDGHLDRLARLAFHPSGKYLGTASFDKTWRLWDINTGKELLLQEGHSRSV
YGVSLHPDGSLAASCGLDAYARVWDLRSGRLFFTLKGHVKPVLGVSFSPNGYLVATGSED
NFCRIWDLRKRQMLYSIPAHKSIISHVKFEPQEGYYLATSSYDTKAALWSARDYKPIKSL
VGHESKVTSLDISGDGQKIVTVSLDRTIKIWSCRSSTQDNEMELD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccaggccccaggccccagcactcacccctcccatggccccgctccccgtc
cccatccacccgccaatcgccccaatccccgtccctccgccccgcgtgcccgcccccgcc
ccagccgccgccgcttccatggcctccacacccactccctccactggggacggaggcgag
gccgagtacgaagtctccgacgaccaccgcgccgcgcgggagcgccacgagcgcgcggtg
caggagctcctccagcggcgccgcgcctacgccatggccgtacccaccaacgactccgct
gtgcgggcccgcctccgccgcctcggcgagcccatcacgctattcggcgagcgcgagatg
gagcgccgcgaccgcctccgagccctcatggtccggctcgaggccgatggccaggtcgac
cgtctcctccgcgcgcaggaggacgaccaggccgcgcgcatcggcgaggaggaggaggag
gagcagatcgagtaccccttcttcaccgagggctcgcaggagcttctcaaggcgcgcctt
gacattgcacggtactcgctgccccgtgccaaggccaggatcgagagggccaagcgacgc
cacgaggaccctgatgaggatccagaggcggaggccgaactcgtcgtcaagcaggccggg
gagtttgtgctcgagtgcagtgagattggagatgatcgcccgctcactggctgttccttc
tctcgtgatgcatcgatgctcgccacaagttcctggagtggaatagtcaaagtatggagc
atgccacaaataactaaggttgcaaccttgaaaggtcacacagaacgtgcaactgatgtt
gtcttctctcctgctgatgactgcttagcaacagcttcagctgatagaactgcaaaatta
tggaaaccagatgggtcacttttgatgtcttttgatggccaccttgatcgtcttgctcgc
cttgcttttcatccatctggaaagtaccttggtacagctagctttgacaagacttggaga
ttgtgggacatcaatactggcaaggaactgctactccaagaggggcacagcagaagtgta
tatggagttagccttcaccctgatggttctttggcagcatcttgtggtcttgatgcatat
gctcgagtatgggatctgagatctggaagattgttctttacactcaagggccatgtgaaa
cctgtcctaggagtcagcttctctcctaatggttatctggttgcaactggaagtgaagac
aatttctgtcggatatgggatttgaggaaaaggcaaatgttgtattctattccagctcat
aagagtattatttcacatgtgaaatttgaaccccaagaagggtattatttagcgacttct
tcctatgacaccaaagcagccctgtggtcagctcgtgattacaaaccaatcaaaagtttg
gtgggccatgagtcgaaggttactagtttggatattagtggagatggacagaagattgtg
actgtgtcgcttgatcgtacgataaaaatttggtcatgcagaagtagcacacaagataat
gagatggaactggattga
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