Zea mays (maize): 100280040
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Entry
100280040 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100280040
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100280040
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100280040
Surveillance factors
Other surveillance factors
100280040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
100280040
NCBI-ProteinID:
NP_001318104
UniProt:
K7V9W1
B8A1I5
LinkDB
All DBs
Position
8:167195802..167202701
Genome browser
AA seq
1536 aa
AA seq
DB search
MAERKLDRPSALGKGGLSLGIEEDRAAAAMGFVDHSKDQHHLDNSIPLSPQWLYAKPADG
KISLPHGSSLEPAEKEARMLEGTADRKERRRNVFDADSGLRWLEEERETSLLGRRERKKD
VDRDVDNRKIDRRSDNVSARDNTDPRTAPSSERWNDGSTRSLGNEGRRDAKWSSRWGPDD
KEKDSRSDKKVDAEKDETHADKQAFTGRLLSESDSRDKWRPRHRQESHSVGTATYRAAPG
FGSEKGRVKDSSNVGFAAGRGRGNPNSVASFNRPSSAGSIGAPAVHGKFAKTAVSFRYPR
GKLLDIYRQKNMMSSFDDAHMKLDEIPSITLSIAAKPLAFVAPDTVEEALLEDIRKGKVI
SSEGINGTGNKERAKELEEPASGIDDDKGKASFAIAGLGQEGSSGLISVNDAFYVEGTLP
SGVSTSLPKKSLEGNAFSNQHRITDTQEGLKTAEIKENVDHDLGTKLPDDSNTLFDVPSF
EHLQEPPKPYQSNNMDTKVGGHAIYPEELTLYYLDPQGGVQGPFLGADIISWYEDGYFGL
ELPVRLSQFSDDVPFRPLVEVMPHLVQKPQSRIPVPCDGNSESLESSQSKFESSVRSASS
VRGDQLSNWDTESNAVDPKRGDHEESIPSRSGWLSSPETGKDISNTSNRQQHIPESVNQD
AEEVLYTGRPNSSMGQSLRDLENDHADFQLTPHDPHSVVGEANLPQHNVPRDSDLSPLGL
LWSELEGHPKQPLSSNVLGVNERRNSKPTTPKDILPVNMRQGPLSRMNEVSSVRDEWPAN
FGRLDNMNGPNISGRIPQVEAEHHLNFDGHLLLQQIRREQQQHQQRQEQLMARSNLEFSG
AFPGQVFDSLHQHRQPMNQQLPDVEHLLRVQFELEQQQQHQLQQEQHQRQLQQQRQAQFL
QRQQQQQQQQMILEQLLQQQLQGSNFGPTNMVDQVLLREHVFNELHQQPHHLQRQHDAAI
EQLIQAKFGHGLHREHHNDMLDVLSRSNQRQMLPLEQQILLGLQHEHEQQLQSQQLANAL
RQHSGREEEMHLSGVWPMDDAAQFIRSGTSPNQRHGCFDLLENLQRSSSFDHHDHLDRSL
SLQERLHMGGLGIHSLERSDSLPGGGPGPNTDVINALSRHHGLGQLETHGDVYPLGQMPM
LPSGVHPQQHRHQEQLPGSHIGRRERHWSDANGQLQNSLMQSSHINQLQMEVEKQRRNVE
MNLSVDNPHAWAALMNKERNAEQDLSDMIHKKLALQSQQSLGFPDVSVAASFGHKDHFVQ
PVAENPLKSVDMLSFEESLSERSLYAKSGQLAQEGSANLGTLPNSIENTGNFNLRPGSGS
MFEQKHFLGIDDVQSDFSETTGGRTSANQLVGSVNELTRGKRQGSSASLAGDDTNFSEEA
VSKWSDSGMSKGSSHSLLKRSTSQHSTTSQSVSADLSVIRLKKAGLASSDENKMESGLAS
VAQGMEGCVISNKETGAYGMPSATNNPDASGQSFSEALKSSRKPQLQYDASESADGGPGG
KGAKKKTKKGKQIDPSLLGFKVHSNRIMMGEIVRDD
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaggaagctggatcgaccctcggcactcggcaaaggtgggctgtcgcttggg
atcgaggaggacagggccgccgccgccatggggttcgtcgaccactccaaagatcagcac
cacctggataacagcattcccctttctcctcagtggctctacgccaaacctgctgatgga
aagatctcgctgcctcatgggtcctcccttgaacctgctgaaaaggaagcgaggatgttg
gaaggaactgctgataggaaagaacgaaggaggaatgtatttgatgctgacagtggtctt
cgttggcttgaagaggagagggagacaagccttcttgggaggagggagcgcaagaaggat
gtagaccgggatgtggataaccgcaagatcgatcgccgatctgacaatgtttctgcaagg
gacaacactgatccgcgcacagctccttcatctgaaaggtggaatgatggttccacccgt
agcctggggaatgagggtcgacgtgatgcaaaatggtcatcaagatggggccccgatgac
aaggagaaggactccaggtcagacaagaaggttgatgcagagaaggatgaaactcatgct
gataaacaggccttcacaggaaggctgctgtctgagtccgattcccgtgataaatggagg
cctcgtcaccggcaggaaagtcattctgttggaacagctacgtaccgtgctgctccaggc
tttggatccgagaaaggacgtgttaaggactcgtctaatgttggttttgccgctggaaga
ggcaggggaaacccaaactcagttgcatccttcaaccggccatcatctgcaggatcaatc
ggtgctccagctgtgcatgggaaatttgcaaaaactgcagttagtttccgctacccaaga
gggaagcttcttgatatatacaggcagaaaaatatgatgtcgtcgtttgatgatgcccac
atgaaactggacgaaattccttctatcacactctctattgctgcaaaacctctagcattt
gttgcaccagatactgttgaagaggctctcctggaagatattagaaagggtaaagtcatt
agcagtgaaggaatcaatgggactggaaacaaggagagggcaaaagagctcgaagaacct
gcttctggtattgatgatgacaagggcaaagccagttttgcaattgctgggttgggtcaa
gaagggtcttcaggtttaatctcagtgaatgatgccttctatgttgaagggacacttcct
agtggtgtcagtacatctctgccgaagaaaagtctggagggaaatgccttcagcaatcaa
cataggattactgacactcaggaaggtttgaaaactgctgagatcaaggaaaatgttgat
catgatcttggcactaagctacctgatgattcgaacactctgtttgatgtaccatccttt
gagcatcttcaagaaccccctaagccataccaaagcaacaacatggatacaaaagtgggt
ggccatgctatttatccagaagagttgacattatattatctggatccccaaggaggtgtg
cagggtccatttctgggtgctgacataatctcttggtatgaagatggatacttcggtttg
gagttacctgtacgtctgtctcagttttcagatgatgttccttttcgcccacttgttgaa
gtcatgccccaccttgtgcaaaagccgcaatcgcgtatacctgtaccttgtgatggaaat
tctgaatctcttgaatcatctcaaagtaaatttgaatccagtgtccgttctgcttcctct
gtgaggggtgaccaattgtctaactgggatactgaaagcaatgctgttgatcctaaaaga
ggtgatcatgaagaatcaataccttctcgtagtggttggctatcttcaccggaaacagga
aaggatatatcaaatactagtaatcgccagcagcacattcctgaatcagtgaatcaggat
gccgaagaagtgttgtacactgggaggcctaacagtagcatgggtcaatctttacgagac
cttgagaacgaccatgcagatttccagttgacaccacatgatccccattctgtggttgga
gaagctaatttgccgcagcataatgtcccaagggacagcgatctgagtcctcttggctta
ctttggtctgagctggaagggcatccaaaacaacctctctcatcaaatgtacttggtgta
aatgaacgtagaaactccaagcctacaacacccaaggacattctacctgtaaacatgaga
caagggccacttagcaggatgaatgaagtttctagtgtgcgtgatgagtggcctgcaaac
tttggacggctggacaatatgaatggccctaacatttctggcagaatccctcaggttgaa
gctgagcatcatttgaattttgatgggcacctcctgcttcagcagatcagacgggagcaa
cagcaacatcaacagcgacaggagcaattgatggcccgtagtaatttagagttttctggt
gcatttcccgggcaggtgtttgattctttgcaccaacaccgacagcctatgaatcaacag
cttcctgatgtagagcatcttttgagagtccagtttgaacttgagcaacagcagcaacac
caactccaacaagagcagcaccaacggcagctacagcagcaacgacaagcccagtttttg
caacgacagcaacagcagcagcagcaacagatgattcttgagcaattgttgcagcagcag
ctgcagggttctaattttggaccaacaaatatggttgatcaagtcttacttcgtgaacat
gtatttaatgaactgcaccagcagcctcaccatttgcaaaggcagcatgatgcagctatt
gaacaacttattcaagccaaatttggtcacgggcttcatagggagcaccataatgatatg
ttggatgttctctcacgttcaaatcagagacaaatgcttcctttagagcagcaaattctt
ttaggccttcagcatgagcatgaacaacaacttcagtcccaacaattggcaaatgctctg
cggcaacattcaggcagggaagaagaaatgcacttaagtggggtctggccaatggatgat
gctgcccagtttatccgctcaggaaccagtccaaatcagagacacggttgtttcgatctc
ctggagaaccttcagagatcgtcatcgtttgatcatcatgaccatctagaccgcagctta
tcgttacaggaacgattgcatatgggtggtctaggtattcactccctagaacgatctgat
tctttgcctggtggtggtcctggaccaaacacagatgtcataaatgccctatcacgccat
catggacttgggcagttggaaacacatggtgatgtataccctttgggtcaaatgcctatg
cttccttcaggtgttcatcctcagcaacataggcatcaggaacagcttcctggttctcac
ataggaaggcgtgaaaggcactggtcagatgccaatggtcagttgcaaaatagtctaatg
caatcttcacacatcaaccagttgcagatggaagtggagaagcagaggaggaatgtggaa
atgaacctttctgttgacaatccacatgcatgggcagccctaatgaataaagagaggaat
gcagaacaagatttgagtgatatgattcacaagaaacttgcccttcaatcgcagcagtcc
cttggttttcctgatgtttctgttgcggcatcatttgggcataaagatcactttgtgcaa
cctgttgcggagaaccctctgaaatcagtggacatgttgtcgtttgaggagtctctttca
gaaaggtcactttatgcaaagtcagggcagttggcacaagagggatcagctaatctgggt
actttacccaacagtattgagaacactggaaattttaaccttagaccaggatctggatca
atgtttgagcagaagcatttccttggaattgacgatgttcaaagtgacttttcagagacc
acaggtggtagaacatcagctaatcaactggttgggagtgtcaatgaattaacaaggggt
aaaaggcagggttctagtgcaagtttggctggggatgatactaatttttctgaagaagct
gttagtaaatggtctgattctggcatgtcaaaaggaagctcacactccttactaaagcgc
tctacaagccaacatagtactacatctcagtctgtttctgcagatctgtcagtgatcagg
ctgaagaaagcaggacttgcatcctctgatgagaataagatggaatcaggattggcctca
gtagcccagggtatggaaggctgcgttattagcaacaaagagacgggggcgtatggcatg
ccatcagccaccaacaatccagatgcctctggtcagtccttcagcgaagcgttgaagagt
tcgaggaagcctcagttgcagtacgatgcctccgaatctgcagatggtggcccaggtggt
aagggcgcaaagaagaaaacgaagaaagggaagcagattgacccttctcttcttggcttc
aaggtccacagtaaccggatcatgatgggcgagattgttcgagatgattag
DBGET
integrated database retrieval system
