KEGG   Zea mays (maize): 100280230
Entry
100280230         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100280230
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
zma  Zea mays (maize)
Pathway
zma03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100280230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zma03009]
    100280230
Ribosome biogenesis [BR:zma03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100280230
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_VPS8 Beta-prop_SPT8 WD40_RFWD3 PEP5_VPS11_N VPS8_N Beta-prop_DCAF12 B-prop_COPA_B_2nd Utp12 Nbas_N
Other DBs
NCBI-GeneID: 100280230
NCBI-ProteinID: NP_001339084
UniProt: K7VAV4
LinkDB
Position
9:complement(99334749..99344084)
AA seq 904 aa
MGIFEPFRAIGYITASGVPFSVQRLSTETFVTVSVGKAFQVYNCAKLNLVLAGPQLPKKI
RAIASYKDYTFAAYGSDIAVFKRTDQVATWSRHEEKVNMLYLFGEYVLSADAKGNVFMWA
FRGAEPNTEPVGSISLGDKFTPTCIMHPDTYLNKVIVGSEEGSLQLWNISTKKKLYDFNG
WNSPVRCCVSSPALDVVAVGCSDGSVHVHNVRYDEELMSFNHQIRGAVTALSFRTDGQPL
LASGGSSGVISIWNLEKRRLHSVIREAHDGSIVSLHFFANEPILMSSAADNSVKMWIFDS
NDGGARLLRFRSGHSAPPRCIRFYGNGKCILSAGQDRAFRLFSVIQDQQSRELSQRHVAK
RAKKLRVKEEEIKLKPVVTFDCAEIRARDWCNVVTCHMDTPQAYVWRLQNFVIGEHVLTP
SSSTVTPIKACVISACGNFTILGTEGGWIEKFNLQSGFSRGSYIDTSLAMQCAHDGEVVG
LACDARNGFLISAGYQGDIKAWDFKTCKLKSRLDVGKSVTKIAFHRPNGLLATVAGDMVL
ILFDTVSMKMVRRFEGHTDRITDLCFSEDGKWLISSSMDGTLRIWDISLARQIDAMHVDV
SITSISMSPNMDVLATTHVDQNGVYLWVNQSLFSVSTNTENYASGKHVRNVCLPAVSSTE
RSEEEQVQNLGESYKSSIKPFVITDHQIPNLVTLSLLPKSQWQSLTNLDIIKVRNKPIEP
PKKPEKAPFFLPSVPSLSGEILFEPPASSKDTDISTTKNTNHKMSELSSHFSQQLQFCGE
TKNYSAFTDYLKGLSPSSLDMELRMLQILDDEESEDLEQRPELQSISSLLDYFIHELSFR
NNFEFVQAVLKLFLKIHGETIRRHSMLQSKVKKLLEVQSLVWQKIDKIFQGARCMVTFLS
NSQF
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggggatcttcgagccgttccgtgcgatcggctacatcacggcgagcggcgtgcccttc
tccgtgcagcgcctcagcaccgagaccttcgtcaccgtcagcgtcggcaaggctttccaa
gtctataactgtgctaagctgaatttggttcttgctggaccccaattgcccaagaagatc
cgtgctattgcatcctacaaggattatacatttgctgcttatggaagtgatattgcagtt
ttcaaaaggactgaccaggtggctacttggagtagacatgaagaaaaggtcaacatgcta
tacctatttggagaatatgttctaagcgcagatgctaaaggtaatgtattcatgtgggcc
ttcagaggagcagaaccaaacactgaaccagttggaagcatatcattgggagacaagttc
accccaacatgtatcatgcatcctgatacttatctgaataaggtaattgttggtagcgaa
gaaggctccttgcagctgtggaatatcagcacaaaaaagaaactgtatgatttcaatggt
tggaactcacctgttcggtgttgtgtctcttctcctgccctggatgtagttgctgtcgga
tgttctgatgggtcagttcatgttcataatgtaagatatgatgaagaattgatgtctttc
aaccaccagattcgtggtgctgtgactgcactgtcatttcgaacagatgggcaacccctt
ctggcttctggaggttcttcaggcgttatcagcatatggaatcttgagaagagacggctg
cattctgtgattagggaggcccatgatggttcaatagtttcacttcacttttttgcgaat
gaacctattctgatgagttcagctgctgacaattcagtcaaaatgtggatatttgatagt
aatgatggaggtgctcgtctgttacgatttcgaagtggtcacagtgcaccacctaggtgc
ataagattctatggcaatggaaaatgcatattatctgctggccaagatcgtgcatttcgc
cttttctcagttatccaggatcaacaaagtagagagctttctcagaggcatgttgcaaaa
agagcaaaaaagctaagagtaaaggaggaagagatcaagctaaaaccagttgttacattt
gactgtgctgagatacgtgcacgtgactggtgtaatgttgtcacatgccacatggatact
ccacaggcatatgtatggcgtcttcagaactttgttattggtgaacatgttttgacacca
tcatcaagcactgtgacaccaattaaggcttgtgtgataagtgcatgtggtaattttact
atcttgggcactgaaggtggttggattgaaaaatttaaccttcaatcagggtttagtcgt
ggtagttacattgacacctcgttggcaatgcaatgtgcacatgatggtgaagttgttgga
ttagcttgcgatgccagaaatggctttttgattagtgctggataccaaggtgatattaag
gcatgggattttaaaacttgcaagctgaaatctagattggatgttggtaaatctgttact
aaaatcgcatttcaccggccaaatggtcttcttgctacggtagcaggtgatatggtactc
atattgtttgatacggtgtccatgaaaatggttcgtagatttgaaggacatacagaccgt
atcactgatttgtgcttcagtgaggatggaaaatggctcatctcgtctagcatggatggg
actcttaggatttgggacatcagtttagcaaggcagatagatgcaatgcatgttgatgta
tctataacatctatctctatgtctcctaatatggatgtgttggcaaccactcatgttgat
caaaatggtgtctacctctgggttaatcaatctttattctcggtctcaacaaatactgaa
aattatgccagtggtaaacatgtacggaatgtgtgtttgccagctgtttcatcaacagag
agatctgaggaagaacaagttcagaatttaggagagtcatataagtccagtattaaacct
tttgtcataacggatcatcaaataccgaatctagttaccctctccttacttccaaagagt
caatggcaaagtttgactaatcttgacattataaaggttcgcaataaaccaattgagcca
cctaagaaacctgagaaggcaccattcttcttgccttcagttccatccctttctggggag
atattgtttgagcctcctgccagctcaaaagatacagacatcagtaccacgaagaataca
aatcataagatgtctgaactctcctctcatttcagtcagcagttgcaattttgtggtgaa
acaaagaactattcggcttttactgactacctaaaaggcctgtcaccgtcgtctttagat
atggaactgcgaatgctacaaatattagatgatgaagagtctgaagatctggagcaaaga
cctgagcttcagtccatttcttcgctgttggattatttcattcatgaactttccttcagg
aataactttgagtttgtccaggctgttctgaaattgtttttgaagatacatggtgaaaca
atacgacggcactcaatgcttcagagtaaggtgaagaagcttcttgaggtccagagctta
gtttggcagaagattgataagatctttcagggtgcacgatgcatggttacattcctcagt
aactcacaattttag

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