Zea mays (maize): 100280358
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Entry
100280358 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100280358
KO
K14962
COMPASS component SWD2
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100280358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100280358
03036 Chromosome and associated proteins [BR:
zma03036
]
100280358
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100280358
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
100280358
COMPASS/SET1 complex (yeast)
100280358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_SCAP
PQQ_3
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
PQQ_2
PQQ
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
100280358
NCBI-ProteinID:
NP_001146756
UniProt:
B8A3D6
LinkDB
All DBs
Position
7:complement(1465672..1471063)
Genome browser
AA seq
302 aa
AA seq
DB search
MDFHSKATNYLVTASDDESIRLYDTQDAVCLNTINSKKYGVGLVCFTDNPSIVLYSSNNG
WDESLRLLSMNDNRFIRYYKGHLDRVVCIALCSGKENFLSCSLDRTILLWDHRAEKPQGL
LRAQRRPTVSYDAQGMVFAVAYGGRIKMFDIRKFGMGPFATFSVGTDDSEAHVVQFSGDG
RRILLTTKAGRVHVLDSFEGNSIASFRAKPILTNSTLEASFCPEGNHIVSGSGDGSVYAW
NVESGKVACWESTDVKPPRVRWSPGSLMFVTGTSELSCWVPDLSKLESFTISHTNTRSSS
SL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggactttcacagcaaggctaccaactatctcgtgacagctagcgatgatgaatcaatc
cgtttatacgatacccaagatgcagtgtgtttgaatactattaatagcaaaaaatatggg
gttggacttgtgtgcttcactgataacccatctattgtcttatattcatcgaacaatggc
tgggatgaatctctgcgtctgctctcaatgaatgataaccggtttattagatattataaa
ggtcaccttgatagggttgtctgcatcgcactttgctctggaaaagaaaactttctctca
tgttcgcttgatcgtaccattctcttatgggaccatcgggctgaaaaaccgcagggctta
ctgcgcgcgcaaaggaggcctacagtttcgtacgacgcccagggcatggtatttgctgtc
gcctatggtggccgcataaagatgtttgatattcggaaattcggaatggggccttttgcg
accttctctgtcggcactgatgattcggaagcccatgtcgtacagttcagcggtgatggc
aggcggattctgttaaccactaaagctgggcgtgttcatgtgctagattcttttgaaggc
aacagcattgcatcgtttcgcgcgaagccaatattaaccaattcgacactggaggcatcg
ttctgtcccgagggaaaccatatcgtatctggctccggtgatggtagtgtctatgcttgg
aacgttgagagcggaaaggttgcatgctgggaaagcacagatgtgaaaccgccgcgggta
aggtggtctccaggatccttgatgttcgtgacaggaacgtcggagctgtcctgctgggtg
ccggatttgtccaagctggagtccttcaccatcagccacaccaacaccaggtccagctcg
tccctgtag
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