Zea mays (maize): 100280472
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Entry
100280472 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100280472
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100280472
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zma01009
]
100280472
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100280472
03036 Chromosome and associated proteins [BR:
zma03036
]
100280472
Protein phosphatases and associated proteins [BR:
zma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100280472
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100280472
Chromosome and associated proteins [BR:
zma03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100280472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
COQ7
Motif
Other DBs
NCBI-GeneID:
100280472
NCBI-ProteinID:
NP_001146864
UniProt:
B6SGQ1
A0A8J8XE53
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All DBs
Position
1:262798972..262819690
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AA seq
522 aa
AA seq
DB search
MFNKIIKRGNRKGARGDNAEAAARPAAPSSSSGSGGGGAGAAAPVTVNHASRATAPSPSS
PTSPHVAPSALATNPAGAASPPLLEPLPLLRDVAAADRPGLFLRKLRIVAALFDLSDSLK
HPREKEAKRQALLELVDYVQAPAQAAGANAPTRLPDHVQEALVAAISANIFRPLPPALHE
SAAAIDPGAAPDEEEEPYLDPSWPHLQLVYELLLRYVVSPDTDTKVAKRYVDHAFVLRLL
DLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNVFYRFIFETQRHNGIGELLEIL
GSIINGFALPMKEEHKLFLARALIPLHKPKSVAIYHQQLSYCIVQFVEKDYKLADTVIRG
LLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNSSHFQVAERALF
LWNNDHIVSLIAQNRVVIFPIIFEALERNIQSHWNQAVHGLTANVRKMFLDMDSELFEEC
QQQYMEKQAKAKEIQEQRESAWRQLEAVVAAKAAGDDMVLVN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcatcaagaggggaaaccgcaagggcgcgcgcggggacaacgcggag
gccgccgcgcgccccgcagcgccctcgtcgtcctccgggagcggcggcggcggcgcgggg
gcagccgcgcccgtcaccgtcaaccacgcctcccgggccacagcgccttcgccgtcctcg
cccacttcgccgcacgtggcgccgtctgcgcttgcgaccaacccggcgggggcggcgtcc
ccgccactcctcgagccgctcccgcttctccgcgacgtcgccgccgcggatcgcccgggc
ctcttcctccgcaagctccgcatcgtcgccgcgctctttgacctttcggactcgctcaag
cacccacgggagaaggaggccaaacgccaggctctcctcgagctcgtcgattacgtgcag
gctccagctcaggcagcgggcgccaacgcacccacgcgcctcccggaccacgtccaggag
gcgctcgtcgccgccatctctgccaacatcttccgcccgctaccacccgcgctgcacgaa
tccgccgccgcgatcgaccccggcgccgcgcccgacgaggaggaggagccatacctcgac
ccctcctggccacacctccagctcgtctatgagctccttctccgatacgttgtttcgccc
gacaccgacaccaaggtcgccaagcggtatgtggaccacgccttcgtcctccgtctcctc
gacctctttgactccgaggatccgcgtgagcgcgagtacctcaagaccgtgctccaccgc
atctatggcaagttcatggtacaccgaccattcattcgcaaggccatcaacaatgtgttc
taccggttcatctttgaaacgcagcgccacaatggcataggggagctccttgagatcctt
ggaagcatcattaatggctttgccttgccaatgaaggaggagcacaaactattccttgcc
cgtgctctcatccccctgcataagcccaaatctgttgcgatctaccatcagcagctgtcc
tattgtattgttcagttcgttgagaaggactacaaattagcagatactgtgattaggggt
ctgctcaaatactggccagtcacaaactgccagaaagaggtgttgtttctgggggagctt
gaagaagtgctcgaggcaacacagcctgcagagttccagcggtgcatggtgccactgttc
aagcagattggacgatgccttaacagttctcacttccaggttgctgaacgtgctttgttc
ttgtggaacaatgatcatattgtaagcttgatagcacaaaatcgtgttgttatatttcca
attatatttgaagctcttgagaggaatatacagagccactggaatcaagcagttcatggt
ctcactgcaaatgtgcgcaagatgtttttggacatggacagtgaactatttgaagagtgc
cagcagcagtacatggagaaacaagcgaaagccaaagagatacaggaacaacgagaatca
gcatggagacaattggaagctgttgttgctgccaaggctgctggagatgacatggttttg
gtcaactag
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