Zea mays (maize): 100280567
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Entry
100280567 CDS
T01088
Name
(RefSeq) pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zma03016
]
100280567
Enzymes [BR:
zma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100280567
Transfer RNA biogenesis [BR:
zma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100280567
Prokaryotic type
100280567
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
100280567
NCBI-ProteinID:
NP_001353065
LinkDB
All DBs
Position
3:140678959..140686979
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AA seq
386 aa
AA seq
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MTDRNPAAASSKRHCDLSLDDPTPSAKLQRCSEPSEPTPAGKPNGGAATGEESEMMAGAR
NPRAQRYLVAVEYIGTRFSGSQKQPNQRTVTGVLEEAFHRFIGQPVSIIFSSRTDAGVHA
LSNVCHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLLKSEGDIMVTDVCCVAPDFHARY
KSLERTYHYRLLAGPESTSVFEKNSVWHISEDLDIQSMKKACSILVGHHDFSSFRAAGCQ
ANSPVRTLDELSVTEVFPFMFFPSSVERSELELSNVSLVYSRKPDMESSGKGSDGSCTSS
VKSDFENGKDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERILDA
KTVTAAPSMAPSCGLYLANVKYDLNT
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagaaaccccgccgccgcctcaagcaagcgtcactgtgacctctccctcgac
gatcccacgccgtcggccaagctccagcggtgctccgagccgtcagaaccaacgccggcg
gggaaaccgaacggcggcgcggcgacgggagaggagagcgagatgatggccggcgcacgg
aaccctagggcgcagaggtacctggtcgccgtggagtacattggcacccgcttctccggc
tcacagaagcagcccaaccagcgcaccgtcactggggtcctcgaggaggcatttcaccga
tttattgggcagccagtttcaataatcttttctagccgaacggatgcaggtgttcatgct
ttatcaaatgtttgtcatgttgatgttgagcggataagtaaaaggaagcctggcgaagtt
ttaacacctcatgagcctggagttgtaaaacgtgctgtgaaccactttctactgaagagt
gaaggtgacataatggtgactgatgtctgctgtgttgcaccagattttcatgctagatac
aaatctctagagcgcacatatcactatcgcttgcttgctggacctgaatcaacatctgtt
tttgagaaaaactctgtttggcatatatctgaagatttggatattcagtcaatgaagaaa
gcatgcagcatacttgttgggcatcatgatttcagttcatttcgagcggctggatgtcag
gcaaactctccagtgcgaactctggatgaacttagtgttacagaagtattccctttcatg
ttttttccttcaagtgtagaaagatcagagttggaattatcaaatgtctctcttgtttat
tcaaggaaaccagacatggaatcttctgggaaaggatctgatggttcctgtaccagtagt
gtgaaatcagattttgagaatggaaaagattttggaaagcggtcaaggcaccgttgcttt
gttgttactgcaagggcacggtcttttctttaccaccaggtaaggttgatggtcggtctt
ctaaaatctgttgggactggagatctaacaactgcagatgttgagagaattctggatgca
aagacggttactgctgcacccagtatggcaccttcttgtggtctgtaccttgctaacgtt
aaatatgatctgaatacctga
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