Zea mays (maize): 100280726
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Entry
100280726 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100280726
KO
K07466
replication factor A1
Organism
zma
Zea mays (maize)
Pathway
zma03030
DNA replication
zma03420
Nucleotide excision repair
zma03430
Mismatch repair
zma03440
Homologous recombination
zma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100280726
03420 Nucleotide excision repair
100280726
03430 Mismatch repair
100280726
03440 Homologous recombination
100280726
03460 Fanconi anemia pathway
100280726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
100280726
03032 DNA replication proteins [BR:
zma03032
]
100280726
03400 DNA repair and recombination proteins [BR:
zma03400
]
100280726
Transcription factors [BR:
zma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100280726
DNA replication proteins [BR:
zma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100280726
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100280726
MMR (mismatch excision repair)
100280726
DSBR (double strand breaks repair)
HR (homologous recombination)
100280726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
100280726
NCBI-ProteinID:
NP_001147118
UniProt:
B6SL03
LinkDB
All DBs
Position
1:26282131..26285481
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AA seq
618 aa
AA seq
DB search
MDAAKLVTPVAVSHILAHPSAGSDGAVTDLVVQVLDLKSVGTGSRFSFTATDGKDKIKAM
LPTNFGSEVRSGNLKNLGLIRIIDYTCNVVKGKDDKVLVVIKCELVCQALDAEINGEAKK
EEPPIVLKPKDEWMGVTSPLAMKPKQEVKSASQIVNEQRGNTAPVKPLSMTKRVHPLITL
NPYQGNWVIKVRVTSKGNLRTYRNARGEGCVFNVELTDEDGTQIQATMFNDAAKKFYPIF
ELGKVYYVSKGSLRIANKQFKTVQNDYEMSLNENAIVEEAEGETCIPQVQYNLVKIDQLG
SYVGGRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVSISLWNDLTTTT
GQELLDMADSSPVVAIKSLKVSDFQGVSLSTVGKSTLAINPDLHEAQNLKSWYDSEGKDT
SLAPIGAEMGAARAGGFKSTYSDRVFLSHITSDPAMGQEKPVFFSLYATISHIKPDQNMW
YRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVIKVSDPTGEAWVSVFNEHAEKI
IGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVE
HAAESKYLLEQIAKLTAC
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgccaagttggtgacgccggtcgctgtgtctcacattctggcgcacccgtcg
gcgggctccgacggcgcagtgaccgatctcgtcgttcaggtcctcgacctgaagtccgtc
ggcacgggcagccggttcagtttcacagcaactgacgggaaggataagatcaaggcgatg
cttcccaccaacttcgggtcggaggtccgctctggcaacctgaagaacctcggcctcatc
cgcatcatcgactacacttgcaacgtcgtcaaaggcaaagatgacaaagtcttggttgtc
atcaaatgcgagcttgtgtgccaagcgcttgacgccgagatcaacggcgaggccaaaaaa
gaggagcctccaattgtgctgaagcctaaggacgaatggatgggcgtgacatccccactc
gctatgaagcccaagcaggaggtgaagtctgcgtcccagatcgtgaatgagcagcgtgga
aatactgctcctgtcaagcccctttccatgacaaagagggtccatcctttgatcactctg
aacccctaccagggtaactgggtcattaaggtgcgggtcacgagcaaaggcaacctgaga
acctacaggaatgctcgcggagaaggctgtgtcttcaatgtagagctcaccgatgaggat
ggcacccagatccaagccaccatgtttaatgacgctgcaaagaagttctatccgattttt
gagctgggaaaggtctattatgtctcaaaaggatctcttagaattgctaacaagcagttc
aagactgtccaaaatgactacgagatgtcactaaacgagaatgctattgttgaagaagca
gagggggagacttgcattccgcaagtgcaatacaaccttgtcaagattgatcaactagga
tcatatgtcggtggcagggaacttgtagatattattggtgtggttcagagcgtatctccc
acactcagtgtcaggagaaagattgacaacgagacaataccgaagcgtgacattgttgtg
gcggatgactctggcaaaactgttagtatctctctttggaatgatcttactactacgact
gggcaagagcttttggacatggctgacagttcgcctgttgttgcgataaagagcctaaaa
gtgtctgacttccaaggcgtgtctctttctactgtaggcaaaagtactcttgcgattaat
cctgatctacacgaggctcagaatcttaagtcatggtatgactctgaaggcaaagatact
tcgctggcaccaattggtgcagaaatgggtgccgcacgggccggtggcttcaagtccacg
tattctgatagagtttttctgtctcacattactagtgatcctgccatgggccaggaaaag
cctgttttcttcagtttgtatgccaccataagccacatcaagcctgaccagaacatgtgg
taccgtgcttgcaagacctgcaacaagaaggtgactgaaacttttggatctggatactgg
tgtgagggatgccaaaagaatgactcggaatgctcactgagatacatcatggtcatcaag
gtttccgatcctactggcgaagcatgggtctctgtgttcaacgagcatgcagagaagatc
attggctgcagcgccgacgagcttgatcggatcaggaaagaggagggggacgacagttat
gttctgaagctcaaggaagccacctgggttcctcacctgttccgcgtcagcgtcacacag
catgaatacaataacgagaaaaggcagagaatcactgtgaggagtgaagcgccggtcgag
cacgcagctgaatccaagtacctgcttgaacagatagcgaagcttactgcttgctag
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