Zea mays (maize): 100280946
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Entry
100280946 CDS
T01088
Name
(RefSeq) cleavage and polyadenylation specificity factor 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
zma
Zea mays (maize)
Pathway
zma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100280946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100280946
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100280946
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
100280946
NCBI-ProteinID:
NP_001159123
UniProt:
B8A1U0
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Position
4:77565536..77567450
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AA seq
224 aa
AA seq
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MGLEMVEVMSETVPTVVPAAARENGVDIYPLSRYYFGARDAAGVPRGLETAADRALRLKA
NFAAHGLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKL
SVVDDVEAVEEEDWQIGQCIGMWWRSEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQF
IVPRNMKLLAVPLSQIHGNAQVYGPIIAAIPSLLSKFSFNVISD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggggctcgagatggtggaggtcatgtccgagactgttcctacggttgtgcctgcggca
gcgagggagaacggggtggatatttacccgctcagccgctactacttcggcgccagggac
gccgccggcgtgccccgcggcctcgagaccgccgctgaccgcgcgctacggctcaaggca
aacttcgcggcgcacgggctccgcacgagcgtccacggcgtcctcctggtggagctgttc
gatcacccgcacgtgctgctgctgcaggtccggaactcctccttcctgctcccgggaggc
cgcctcaggcctggcgaggaagaggtccgagggctcaagcgcaagctctccagcaagctc
tccgttgtcgatgatgtggaggccgttgaagaagaagactggcagattgggcagtgcatc
gggatgtggtggagatctgaatttgaggccatcccgtttccctacatgcctccacgattc
cgtgcggcaaaggaatgcatgaagctgttcctgatcaggctgccgatgtcccggcagttc
atcgtgcccaggaacatgaagctcctggccgtgcctttgtcccagattcatggcaatgct
caggtttacggtccaattatagccgccattccgagcctactatccaagttctccttcaac
gtcatcagcgactga
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