Zea mays (maize): 100282102
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Entry
100282102 CDS
T01088
Name
(RefSeq) mRNA 3-UTR binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100282102
03041 Spliceosome [BR:
zma03041
]
100282102
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100282102
Spliceosome [BR:
zma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100282102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_7
Peptidase_C58
Motif
Other DBs
NCBI-GeneID:
100282102
NCBI-ProteinID:
NP_001358756
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All DBs
Position
1:194878677..194883773
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AA seq
446 aa
AA seq
DB search
MNGAGGSHHQQQQRLRQQQQQALLMQQALQQQQQQQYQSGVLAAAAAAAMTQMEPVSNGN
LPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRRS
AALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYP
SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNSEEK
PETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGHEVNRDELHRHF
YNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKCSWGVKPTPPGT
GSKPLPPPAATYQPAVAMPGVPQGFTTAELLAYQRQLALSQAAAGQQHAGLAGQVSAAGL
LAAAGSQALYDGYPNQSSAQQLMYYN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccgggggcagccaccaccagcagcagcagaggctccggcagcagcagcag
caggcgctcctgatgcagcaggcgctgcagcagcagcagcagcagcagtaccagtccggc
gtcctcgccgccgcggcggcggcggccatgacccagatggaacctgtttccaatggcaac
cttccacctgggtttgatccttccacttgtcgcagtgtgtatgttggaaatgtgaaccct
aatgtcacggagagccttttgattgaagttttccagagtgctggccttgtggaaagatgc
aagctcatacggaaagagaagtcttcctttgggtttgtggactactatgatcgaagatct
gctgctctagcaatcatgacccttcatggccgtcacgtatatggacaagcaatcaaggtg
aactgggcatatgcaagtacgcagagggaggatacgtcagggcatttccatatttttgtt
ggtgatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagcatatcct
tcttgttctgatgctcgagtcatgtgggacaacaaaactggacgctccaggggttatggt
tttgtctccttccgtaatcaacaggaagctgaaactgctataactgaaatgactggaaaa
tggcttggaagcagacaaataaggtgcaactgggcaacaaagaacaattcggaagagaaa
ccagaaactgacaatcataacgcagtcgtactaacaaatggtagctccaacaattcagca
acggatgcaagccaggacgcaggaagtaaagagcccccacagaacaatcctgattgtact
actgtatatgttggcaacctcggccatgaggttaaccgggatgagcttcaccgccacttc
tataacttgggggtcggggcgatcgaggaggtccgtgttcagcaggacaaagggtttgga
ttcgtgagatatagcacccacggggaagcagcactcgctattcagatgtccaatgggtcg
gtagtccgcgggaaaccaatcaagtgctcatggggtgtcaaaccaactccaccggggaca
ggctccaagcccctaccccctccagccgcaacgtaccagcccgctgtggcaatgccaggc
gtcccgcaaggtttcacgacagcagaactccttgcctaccagaggcagcttgccctgagc
caggccgcggccgggcagcagcatgctggtcttgcgggccaggtttctgcagcaggcctt
cttgctgctgccggttcccaggccctctacgacggctacccgaatcaatcgtcagcgcag
cagcttatgtactacaactag
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